RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 PRR18Q8N4B5 295 aa15.29■□□□□ 0.04
COL16A1-215ENST00000488897 ZNF665Q9H7R5 613 aa15.29■□□□□ 0.04
COL16A1-215ENST00000488897 A0A1W2PPR1 153 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 TGOLN2O43493 480 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 ZNF16P17020 682 aaPredicted RBP15.28■□□□□ 0.04
COL16A1-215ENST00000488897 BSPH1Q075Z2 132 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 TMEM41BQ5BJD5 291 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 VSIRQ9H7M9 311 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 TRAV39A0A0B4J263 110 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 C3orf80F5H4A9 247 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 IFNA1P01562 189 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 IGHV2-70P01814 119 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 ERVK11-1P61568 191 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 ZNF726P1Q15940 193 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 TBC1D28Q2M2D7 210 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 HAPLN4Q86UW8 402 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 PLPPR2Q96GM1 343 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 RCC1LQ96I51 464 aaKnown RBP15.28■□□□□ 0.04
COL16A1-215ENST00000488897 WDR61Q9GZS3 305 aaKnown RBP15.28■□□□□ 0.04
COL16A1-215ENST00000488897 MBNL3Q9NUK0 354 aaKnown RBP15.28■□□□□ 0.04
COL16A1-215ENST00000488897 GAR1Q9NY12 217 aaKnown RBP15.28■□□□□ 0.04
COL16A1-215ENST00000488897 OR14J1Q9UGF5 321 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 VAX2Q9UIW0 290 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 WIPI2Q9Y4P8 454 aa15.28■□□□□ 0.04
COL16A1-215ENST00000488897 CLDN34H7C241 214 aa15.27■□□□□ 0.04
COL16A1-215ENST00000488897 CYB5R3P00387 301 aaPredicted RBP15.27■□□□□ 0.04
COL16A1-215ENST00000488897 CEACAM6P40199 344 aa15.27■□□□□ 0.04
COL16A1-215ENST00000488897 RND2P52198 227 aa15.27■□□□□ 0.04
COL16A1-215ENST00000488897 PMS2P11Q13670 270 aa15.27■□□□□ 0.04
COL16A1-215ENST00000488897 SCCPDHQ8NBX0 429 aa15.27■□□□□ 0.04
COL16A1-215ENST00000488897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.27■□□□□ 0.03
COL16A1-215ENST00000488897 SEC14L6B5MCN3 397 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 SH2D1BO14796 132 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST1H2BKO60814 126 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST1H2BJP06899 126 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST1H2BOP23527 126 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST1H2BBP33778 126 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST1H2BDP58876 126 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST1H2BCP62807 126 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST2H2BEQ16778 126 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 SPANXN5Q5MJ07 72 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.27■□□□□ 0.03
COL16A1-215ENST00000488897 C1orf87Q8N0U7 546 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST1H2BHQ93079 126 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST1H2BNQ99877 126 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 HIST1H2BMQ99879 126 aa15.27■□□□□ 0.03
COL16A1-215ENST00000488897 FLNBO75369 2602 aaKnown RBP15.27■□□□□ 0.03
COL16A1-215ENST00000488897 ZNF146Q15072 292 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 LURAP1LQ8IV03 231 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 DRAM1Q8N682 238 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 FAM210BQ96KR6 192 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 OR4C12Q96R67 309 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 SDF2L1Q9HCN8 221 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 TRAV20A0A0B4J274 112 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 IGKV3-15P01624 115 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 FGF8P55075 233 aaPredicted RBP15.26■□□□□ 0.03
COL16A1-215ENST00000488897 WDR86Q86TI4 376 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 FGFRL1Q8N441 504 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 ZBTB34Q8NCN2 500 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 C1orf162Q8NEQ5 155 aaPredicted RBP15.26■□□□□ 0.03
COL16A1-215ENST00000488897 TIMM9Q9Y5J7 89 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 ITPR2Q14571 2701 aa15.26■□□□□ 0.03
COL16A1-215ENST00000488897 IFITM10A6NMD0 228 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 NXPH2O95156 264 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 TRGC2P03986 189 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 NKX6-1P78426 367 aaPredicted RBP15.25■□□□□ 0.03
COL16A1-215ENST00000488897 TAF15Q92804 592 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL16A1-215ENST00000488897 CTDSP1Q9GZU7 261 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 DMRT1Q9Y5R6 373 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 APCP25054 2843 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 ELOA3CA0A087WX78 387 aaPredicted RBP15.25■□□□□ 0.03
COL16A1-215ENST00000488897 MAP1LC3B2A6NCE7 125 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 PGA5P0DJD9 388 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 SLC38A11Q08AI6 406 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 MSMPQ1L6U9 139 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 DMRTC2Q8IXT2 367 aaPredicted RBP15.25■□□□□ 0.03
COL16A1-215ENST00000488897 MAP1LC3BQ9GZQ8 125 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 KCNIP1Q9NZI2 227 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 SVEP1Q4LDE5 3571 aa15.25■□□□□ 0.03
COL16A1-215ENST00000488897 CEBPZOSA8MTT3 80 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 CD40P25942 277 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 TMEM14EPQ6UXP3 125 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 SSX7Q7RTT5 188 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 EDARADDQ8WWZ3 215 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 NRGNQ92686 78 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 PPP1R2P9O14990 202 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 OPN1MWP04001 364 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 OPN1MW2P0DN77 364 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 OPN1MW3P0DN78 364 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 PPP1CBP62140 327 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 MSMO1Q15800 293 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 SPNS3Q6ZMD2 512 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 UBALD1Q8TB05 177 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 SLC39A9Q9NUM3 307 aa15.24■□□□□ 0.03
COL16A1-215ENST00000488897 IGHV2OR16-5A0A0B4J2B6 119 aa15.23■□□□□ 0.03
COL16A1-215ENST00000488897 DEFB108AA8MXU0 73 aa15.23■□□□□ 0.03
COL16A1-215ENST00000488897 TNFRSF9Q07011 255 aa15.23■□□□□ 0.03
COL16A1-215ENST00000488897 ALKBH6Q3KRA9 238 aa15.23■□□□□ 0.03
COL16A1-215ENST00000488897 PYY3Q5JQD4 70 aa15.23■□□□□ 0.03
COL16A1-215ENST00000488897 FIP1L1Q6UN15 594 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms