RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PROK1P58294 105 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 MEF2DQ14814 521 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 MSMO1Q15800 293 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 LHFPL1Q86WI0 220 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 KLHDC1Q8N7A1 406 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 OR8H1Q8NGG4 311 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 MRGPRFQ96AM1 343 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 HARBI1Q96MB7 349 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 HSPB9Q9BQS6 159 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 FBXL15Q9H469 300 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 SERTAD4Q9NUC0 356 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 LIN7CQ9NUP9 197 aaKnown RBP8.76□□□□□ -1.01
UBE4B-210ENST00000488228 MMP24Q9Y5R2 645 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 DISC1C4P0D8 188 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 GPR31O00270 319 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 RRHO14718 337 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 SHOXO15266 292 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 RAMP3O60896 148 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 NDUFA3O95167 84 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 IGLV2-23P01705 113 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 VSIG10L2P0DP72 767 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 PGAM2P15259 253 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 BRWD1-AS2P59051 145 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 RPS16P62249 146 aaKnown RBP8.75□□□□□ -1.01
UBE4B-210ENST00000488228 SRSF4Q08170 494 aaKnown RBP8.75□□□□□ -1.01
UBE4B-210ENST00000488228 CATR1Q13166 79 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 CBX3Q13185 183 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 PSG5Q15238 335 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 BAK1Q16611 211 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 C5orf64Q2M2E5 130 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 TMEM177Q53S58 311 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 TRIQKQ629K1 86 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 HIST2H2BDQ6DRA6 164 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 ZNF66Q6ZN08 573 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 SLC38A6Q8IZM9 456 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 NPBQ8NG41 125 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 OR51S1Q8NGJ8 323 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 OR13C8Q8NGS7 320 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 MARCH1Q8TCQ1 289 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 FLYWCH2Q96CP2 140 aaKnown RBP8.75□□□□□ -1.01
UBE4B-210ENST00000488228 TSNAXQ99598 290 aaKnown RBP8.75□□□□□ -1.01
UBE4B-210ENST00000488228 RASL11BQ9BPW5 248 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 RSRP1Q9BUV0 290 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 MCUBQ9NWR8 336 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 KIAA1456Q9P272 454 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 METTL1Q9UBP6 276 aaKnown RBP8.75□□□□□ -1.01
UBE4B-210ENST00000488228 PRELID3BQ9Y3B1 194 aa8.75□□□□□ -1.01
UBE4B-210ENST00000488228 A0A1B0GUS0 222 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 LINC01548A6NM66 108 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 SPDEFO95238 335 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 RRASP10301 218 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 KRTAP10-3P60369 221 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 NDPQ00604 133 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 TAGLNQ01995 201 aaKnown RBP8.74□□□□□ -1.01
UBE4B-210ENST00000488228 PLGLAQ15195 96 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 ZNF57Q68EA5 555 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-210ENST00000488228 IDO2Q6ZQW0 420 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 SLC35E3Q7Z769 313 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 SPAG16Q8N0X2 631 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 TOMM5Q8N4H5 51 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 C3orf56Q8N813 242 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 GDPD1Q8N9F7 314 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 ZBTB34Q8NCN2 500 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 OR4S2Q8NH73 311 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 BORCS5Q969J3 196 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 NOL4LQ96MY1 436 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-210ENST00000488228 SLC2A9Q9NRM0 540 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 LINC00527Q9UJ94 153 aa8.74□□□□□ -1.01
UBE4B-210ENST00000488228 LINC00854A0A1B0GVQ3 168 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 SRRM4A7MD48 611 aaKnown RBP8.73□□□□□ -1.01
UBE4B-210ENST00000488228 PGLYRP1O75594 196 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-210ENST00000488228 IGHG2P01859 326 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 HLA-DRB1P01911 266 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 SAA1P0DJI8 122 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-210ENST00000488228 IL7P13232 177 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 UCP3P55916 312 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 AP3S2P59780 193 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 ZNF45Q02386 682 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 C10orf99Q6UWK7 81 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 TBC1D26Q86UD7 250 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 CMTM1Q8IZ96 169 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 VKORC1L1Q8N0U8 176 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 C11orf44Q8N8P7 122 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 TERB2Q8NHR7 220 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 OSR1Q8TAX0 266 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-210ENST00000488228 CLCC1Q96S66 551 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 PRRT1Q99946 306 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 HRASLSQ9HDD0 168 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 PARP11Q9NR21 331 aa8.73□□□□□ -1.01
UBE4B-210ENST00000488228 IGHV7-81A0A0B4J1V7 117 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 FCN1O00602 326 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 ATP6V0E1O15342 81 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 S1PR2O95136 353 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 CA2P00918 260 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 FAUP35544 74 aaKnown RBP8.72□□□□□ -1.01
UBE4B-210ENST00000488228 KIR2DS2P43631 304 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 INPP1P49441 399 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 PIGPP57054 158 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 GNB1P62873 340 aa8.72□□□□□ -1.01
UBE4B-210ENST00000488228 PJVKQ0ZLH3 352 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms