RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ABHD12Q8N2K0 398 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 OR2C3Q8N628 320 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 TNFRSF14Q92956 283 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 TMEM186Q96B77 213 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 HSPB7Q9UBY9 170 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 IGHV2-26A0A0B4J1V2 119 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 IGSF23A1L1A6 192 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 TAAR5O14804 337 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 SYNGR2O43760 224 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 CHST1O43916 411 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 ATP6V1G1O75348 118 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 NQO2P16083 231 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 ARHGDIBP52566 201 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 POU2AF1Q16633 256 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 ALKAL2Q6UX46 152 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 H2BFWTQ7Z2G1 175 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 Q8N7P7 452 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 OR10X1Q8NGY0 326 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 SCARB1Q8WTV0 552 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 BSCL2Q96G97 398 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-211ENST00000487698 RAB40CQ96S21 281 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 MRPL20Q9BYC9 149 aaKnown RBP7.69□□□□□ -1.18
SF3B1-211ENST00000487698 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-211ENST00000487698 FBXL17Q9UF56 701 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 CRYBG3Q68DQ2 2970 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 WNK2Q9Y3S1 2297 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 LOC105371242A0A075B767 164 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 WRBO00258 174 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 CRYZL1O95825 349 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 OR9G9P0C7N8 305 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 COX6B1P14854 86 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 EWSR1Q01844 656 aaKnown RBP eCLIP7.68□□□□□ -1.18
SF3B1-211ENST00000487698 TNFRSF9Q07011 255 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 DIAPH2-AS1Q14236 149 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 HLA-DRB5Q30154 266 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 DHRS7BQ6IAN0 325 aaPredicted RBP7.68□□□□□ -1.18
SF3B1-211ENST00000487698 BEND2Q8NDZ0 799 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 OR5AN1Q8NGI8 311 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 PHYHIPLQ96FC7 376 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 CLEC7AQ9BXN2 247 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 BPESC1Q9GZL8 116 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 WSB1Q9Y6I7 421 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 TNCP24821 2201 aa7.68□□□□□ -1.18
SF3B1-211ENST00000487698 MED13LQ71F56 2210 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 hCG_1809904A0A1W2PP81 198 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 A0A1W2PPE2 198 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 A0A1W2PR64 198 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 A0A1W2PRV1 198 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 FAM24AA6NFZ4 105 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 A8MXK9 166 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 H0YJW9 148 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 M0R1W7 72 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 GAPDHP04406 335 aaKnown RBP7.67□□□□□ -1.18
SF3B1-211ENST00000487698 DLX1P56177 255 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 LMO4P61968 165 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 VAMP2P63027 116 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 PAX2Q02962 417 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 CLLU1Q5K131 121 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 OR8H3Q8N146 312 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 TMEM252Q8N6L7 170 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 GSX2Q9BZM3 304 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 ZC4H2Q9NQZ6 224 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 SLC35D1Q9NTN3 355 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 TMEM140Q9NV12 185 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 ONECUT1Q9UBC0 465 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 PTPN13Q12923 2485 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 A1L4Q6 167 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 IGKV1-16P04430 117 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 TPT1P13693 172 aaKnown RBP7.67□□□□□ -1.18
SF3B1-211ENST00000487698 ZFP36P26651 326 aaKnown RBP7.67□□□□□ -1.18
SF3B1-211ENST00000487698 PDLIM4P50479 330 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 CAV2P51636 162 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 TAS2R30P59541 319 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 UBE2KP61086 200 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 ERVK-16P61578 105 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 RELBQ01201 579 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 TAGLNQ01995 201 aaKnown RBP7.67□□□□□ -1.18
SF3B1-211ENST00000487698 NHLH2Q02577 135 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 RTL8BQ17RB0 113 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 SP5Q6BEB4 398 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-211ENST00000487698 RPL7L1Q6DKI1 246 aaKnown RBP7.67□□□□□ -1.18
SF3B1-211ENST00000487698 CLEC9AQ6UXN8 241 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 BAP18Q8IXM2 172 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 SLC7A5P1Q8MH63 180 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 VKORC1L1Q8N0U8 176 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 KIR3DL3Q8N743 410 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 CLDND2Q8NHS1 167 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 SMIM8Q96KF7 97 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 NABP2Q9BQ15 211 aa7.67□□□□□ -1.18
SF3B1-211ENST00000487698 ANKRD17O75179 2603 aaKnown RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 TENM4Q6N022 2769 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 TXNL1O43396 289 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 IL6RP08887 468 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 PAX1P15863 534 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 IL3RAP26951 378 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 REG1BP48304 166 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 PRRX1P54821 245 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 RPL23AP62750 156 aaKnown RBP7.66□□□□□ -1.18
SF3B1-211ENST00000487698 BAXQ07812 192 aa7.66□□□□□ -1.18
SF3B1-211ENST00000487698 PDLIM3Q53GG5 364 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms