RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 TSPAN9O75954 239 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 NDUFA7O95182 113 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 IGKV1-16P04430 117 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 CTSDP07339 412 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-207ENST00000487645 F2RL1P55085 397 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 RPS16P62249 146 aaKnown RBP10.61□□□□□ -0.71
COL4A6-207ENST00000487645 ABCA11PQ4W5N1 156 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 PHLDA2Q53GA4 152 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 TMEM177Q53S58 311 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 C11orf88Q6PI97 169 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 POC5Q8NA72 575 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 OSR1Q8TAX0 266 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-207ENST00000487645 TMEM158Q8WZ71 300 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 RITA1Q96K30 269 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 TSNAXQ99598 290 aaKnown RBP10.61□□□□□ -0.71
COL4A6-207ENST00000487645 SLC2A9Q9NRM0 540 aa10.61□□□□□ -0.71
COL4A6-207ENST00000487645 PLXNB1O43157 2135 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 NCBP2LA6PVI3 153 aaKnown RBP10.6□□□□□ -0.71
COL4A6-207ENST00000487645 MPPED1O15442 326 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 NBR2O15453 112 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 UPK1BO75841 260 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 NDUFA3O95167 84 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 AMY1AP04745 511 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 HKR1P10072 659 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 F2RP25116 425 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 PIGPP57054 158 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 BRWD1-AS2P59051 145 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 MMDQ15546 238 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 C5orf56Q8N8D9 126 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 Q8N9W7 124 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 CCDC71LQ8N9Z2 235 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 OR4S2Q8NH73 311 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 GPHA2Q96T91 129 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 AIFM2Q9BRQ8 373 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 RTBDNQ9BSG5 229 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-207ENST00000487645 PRSS22Q9GZN4 317 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 C16orf95Q9H693 158 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 KIAA1456Q9P272 454 aa10.6□□□□□ -0.71
COL4A6-207ENST00000487645 C14orf166Q9Y224 244 aaKnown RBP10.6□□□□□ -0.71
COL4A6-207ENST00000487645 LINC00854A0A1B0GVQ3 168 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 TMEM89A2RUT3 159 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 RRHO14718 337 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 SHOXO15266 292 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 SPDEFO95238 335 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 CRYZL1O95825 349 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 RLN1P04808 185 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 PI3P19957 117 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 BLCAPP62952 87 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 RELBQ01201 579 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 KRTAP24-1Q3LI83 254 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 TBC1D26Q86UD7 250 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 SPAG16Q8N0X2 631 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 Q8N2B8 174 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 FAM71E2Q8N5Q1 922 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 OR4F5Q8NH21 305 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 OR51H1Q8NH63 302 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 RBMXL1Q96E39 390 aaKnown RBP10.59□□□□□ -0.71
COL4A6-207ENST00000487645 RASL11BQ9BPW5 248 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 C5orf66Q9H5L9 145 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 LIN7CQ9NUP9 197 aaKnown RBP10.59□□□□□ -0.71
COL4A6-207ENST00000487645 COPZ2Q9P299 210 aa10.59□□□□□ -0.71
COL4A6-207ENST00000487645 TNCP24821 2201 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 LYRM1O43325 122 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 B3GALNT1O75752 331 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 HPRT1P00492 218 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 HRASP01112 189 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 CNTFRP26992 372 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 FOXL1Q12952 345 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 PSG5Q15238 335 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 RBMS2Q15434 407 aaKnown RBP10.58□□□□□ -0.72
COL4A6-207ENST00000487645 C5orf64Q2M2E5 130 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 KRTAP21-3Q3LHN1 58 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 OR2B11Q5JQS5 317 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 Q6ZSV7 163 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.58□□□□□ -0.72
COL4A6-207ENST00000487645 TEX45Q8NA69 505 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 HARBI1Q96MB7 349 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 TSC22D3Q99576 134 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 PLEKHA2Q9HB19 425 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 VSIG4Q9Y279 399 aa10.58□□□□□ -0.72
COL4A6-207ENST00000487645 A0A1B0GUS0 222 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 SRRM4A7MD48 611 aaKnown RBP10.57□□□□□ -0.72
COL4A6-207ENST00000487645 RAMP3O60896 148 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 NDUFB6O95139 128 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 IGLV2-23P01705 113 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 CRYGBP07316 175 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 BTCP35070 178 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 CCR6P51684 374 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 RAG2P55895 527 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 TAS2R31P59538 309 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 IFITM3Q01628 133 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 ASAH1Q13510 395 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 ZNF585BQ52M93 769 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 LIN54Q6MZP7 749 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 MZT2BQ6NZ67 158 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 CADM3Q8N126 398 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 C19orf24Q9BVV8 132 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 ZNF702PQ9H963 129 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 MMP24Q9Y5R2 645 aa10.57□□□□□ -0.72
COL4A6-207ENST00000487645 TEX13DA0A0J9YY54 714 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms