RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MFNGO00587 321 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 BRI3O95415 125 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 IGHV4-30-4P0DP06 118 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 RANBP1P43487 201 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 MRPS15P82914 257 aaKnown RBP9.32□□□□□ -0.92
VPS16-208ENST00000487461 DEFA5Q01523 94 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 HARBI1Q96MB7 349 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 TMEM68Q96MH6 324 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 TM2D3Q9BRN9 247 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 TINAGL1Q9GZM7 467 aaPredicted RBP9.32□□□□□ -0.92
VPS16-208ENST00000487461 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 ADAM30Q9UKF2 790 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 DNAH7Q8WXX0 4024 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 TENM2Q9NT68 2774 aa9.32□□□□□ -0.92
VPS16-208ENST00000487461 IGKV1D-8A0A087WSZ0 117 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 A0A0B4J203 849 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 MSGN1A6NI15 193 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 IFITM5A6NNB3 132 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 PDCD5O14737 125 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 SHOXO15266 292 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 RBMXL2O75526 392 aaKnown RBP9.31□□□□□ -0.92
VPS16-208ENST00000487461 DIRAS3O95661 229 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 TRBV12-3P01733 135 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 APELAP0DMC3 54 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 HIST1H1DP16402 221 aaKnown RBP9.31□□□□□ -0.92
VPS16-208ENST00000487461 DUTP33316 252 aaKnown RBP9.31□□□□□ -0.92
VPS16-208ENST00000487461 SYNJ2BPP57105 145 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 TAGLNQ01995 201 aaKnown RBP9.31□□□□□ -0.92
VPS16-208ENST00000487461 DYRK1AQ13627 763 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 ZNF343Q6P1L6 599 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 H1FOOQ8IZA3 346 aaPredicted RBP9.31□□□□□ -0.92
VPS16-208ENST00000487461 OR9G4Q8NGQ1 327 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 DDB2Q92466 427 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 PEF1Q9UBV8 284 aaKnown RBP9.31□□□□□ -0.92
VPS16-208ENST00000487461 ELF5Q9UKW6 265 aaPredicted RBP9.31□□□□□ -0.92
VPS16-208ENST00000487461 TNCP24821 2201 aa9.31□□□□□ -0.92
VPS16-208ENST00000487461 LINC00473A8K010 186 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 A8MZ25 164 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 CSN3P07498 182 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 RRASP10301 218 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 LYL1P12980 280 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 RAB6AP20340 208 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 AADACP22760 399 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 GADD45AP24522 165 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 CBX3Q13185 183 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 PRSS8Q16651 343 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 RTL8BQ17RB0 113 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 TEX45Q8NA69 505 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 ADAD2Q8NCV1 583 aaKnown RBP9.3□□□□□ -0.92
VPS16-208ENST00000487461 CITED4Q96RK1 184 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 GINS4Q9BRT9 223 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 COA4Q9NYJ1 87 aa9.3□□□□□ -0.92
VPS16-208ENST00000487461 RBM7Q9Y580 266 aaKnown RBP9.3□□□□□ -0.92
VPS16-208ENST00000487461 SMIM31A0A1B0GVY4 71 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 TRDV1A0A1B0GX56 115 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 J3QRK9 145 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 CRYZL1O95825 349 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 TALDO1P37837 337 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 UBE2KP61086 200 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 ARFRP1Q13795 201 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 TBCEQ15813 527 aaPredicted RBP9.29□□□□□ -0.92
VPS16-208ENST00000487461 TNXAQ16473 311 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 VMA21Q3ZAQ7 101 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 IDO2Q6ZQW0 420 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 Q6ZS49 121 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 ZNF367Q7RTV3 350 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 NR2C2APQ86WQ0 139 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 SGPP2Q8IWX5 399 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 USMG5Q96IX5 58 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 ADTRPQ96IZ2 230 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 PHB2Q99623 299 aa9.29□□□□□ -0.92
VPS16-208ENST00000487461 GAR1Q9NY12 217 aaKnown RBP9.29□□□□□ -0.92
VPS16-208ENST00000487461 IZUMO1RA6ND01 250 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 METTL21EPA6NDL7 271 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 H0Y980 276 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 PRH1P02810 166 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 OR9G9P0C7N8 305 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 RAB3BP20337 219 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 MYL9P24844 172 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 MECP2P51608 486 aaKnown RBP9.28□□□□□ -0.92
VPS16-208ENST00000487461 TATDN3Q17R31 274 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 CDNFQ49AH0 187 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 C22orf42Q6IC83 251 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 CNBD2Q96M20 576 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 TSC22D3Q99576 134 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 THAP7Q9BT49 309 aaPredicted RBP9.28□□□□□ -0.92
VPS16-208ENST00000487461 ST6GALNAC5Q9BVH7 336 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 ATG5Q9H1Y0 275 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 EDA2RQ9HAV5 297 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 NDUFB11Q9NX14 153 aa9.28□□□□□ -0.92
VPS16-208ENST00000487461 DYNC2H1Q8NCM8 4307 aaKnown RBP9.27□□□□□ -0.93
VPS16-208ENST00000487461 SMIM30A4D0T7 59 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 DTYMKP23919 212 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 RPL5P46777 297 aaKnown RBP9.27□□□□□ -0.93
VPS16-208ENST00000487461 ZNF45Q02386 682 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 HAGHQ16775 308 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 RPEL1Q2QD12 228 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 ZFAND6Q6FIF0 208 aa9.27□□□□□ -0.93
VPS16-208ENST00000487461 OSR1Q8TAX0 266 aaPredicted RBP9.27□□□□□ -0.93
VPS16-208ENST00000487461 SRSF12Q8WXF0 261 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms