RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SRD5A3Q9H8P0 318 aa14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 C12orf4Q9NQ89 552 aa14.68□□□□□ -0.06
SMPDL3A-202ENST00000487215 UCHL1P09936 223 aa14.67□□□□□ -0.06
SMPDL3A-202ENST00000487215 LINC00476Q8WZB0 136 aa14.67□□□□□ -0.06
SMPDL3A-202ENST00000487215 PLGRKTQ9HBL7 147 aa14.67□□□□□ -0.06
SMPDL3A-202ENST00000487215 LSM2Q9Y333 95 aaKnown RBP14.67□□□□□ -0.06
SMPDL3A-202ENST00000487215 TPRKBQ9Y3C4 175 aa14.67□□□□□ -0.06
SMPDL3A-202ENST00000487215 ERICH4A6NGS2 130 aa14.66□□□□□ -0.06
SMPDL3A-202ENST00000487215 MSGN1A6NI15 193 aa14.66□□□□□ -0.06
SMPDL3A-202ENST00000487215 SRRM4A7MD48 611 aaKnown RBP14.66□□□□□ -0.06
SMPDL3A-202ENST00000487215 FOXI3A8MTJ6 420 aaPredicted RBP14.66□□□□□ -0.06
SMPDL3A-202ENST00000487215 ARL6IP5O75915 188 aa14.66□□□□□ -0.06
SMPDL3A-202ENST00000487215 PSMA1P25786 263 aaKnown RBP14.66□□□□□ -0.06
SMPDL3A-202ENST00000487215 FAM89BQ8N5H3 189 aa14.66□□□□□ -0.06
SMPDL3A-202ENST00000487215 ZNF230Q9UIE0 474 aaPredicted RBP14.66□□□□□ -0.06
SMPDL3A-202ENST00000487215 HSF4Q9ULV5 492 aa14.66□□□□□ -0.06
SMPDL3A-202ENST00000487215 OR11H12B2RN74 326 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 SHOXO15266 292 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 OR9G9P0C7N8 305 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 RHOGP84095 191 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 EXOSC2Q13868 293 aaKnown RBP14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 TMEM177Q53S58 311 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 LIPKQ5VXJ0 399 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 DYNLRB2Q8TF09 96 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 C5orf30Q96GV9 206 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 OR2D2Q9H210 308 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 AKIP1Q9NQ31 210 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 SDHAF2Q9NX18 166 aa14.65□□□□□ -0.06
SMPDL3A-202ENST00000487215 FAM223BA6NKX1 122 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 TRDCB7Z8K6 153 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 SLC17A2O00624 439 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 PRH1P02810 166 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 EDN2P20800 178 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 PSMD7P51665 324 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 TMEM50BP56557 158 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 ZNF45Q02386 682 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 DEFB114Q30KQ6 69 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 FAM223AQ8IWN6 122 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 SRSF12Q8WXF0 261 aaKnown RBP14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 ARHGAP5-AS1Q96IT6 56 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 CMSS1Q9BQ75 279 aaKnown RBP14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 ZC4H2Q9NQZ6 224 aa14.64□□□□□ -0.07
SMPDL3A-202ENST00000487215 CD3GP09693 182 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 HSMCR30P0CW71 290 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 SERPINB10P48595 397 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 CBX3Q13185 183 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 TPBGQ13641 420 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 IRF3Q14653 427 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 P2RY14Q15391 338 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 RAB11BQ15907 218 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 TNXAQ16473 311 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 PRSS8Q16651 343 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 GUCA2BQ16661 112 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 TMEM203Q969S6 136 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 PECRQ9BY49 303 aa14.63□□□□□ -0.07
SMPDL3A-202ENST00000487215 HERC2O95714 4834 aa14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 TRBV9A0A0B4J1U6 114 aa14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 MPPED1O15442 326 aa14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 LY6G6CO95867 125 aa14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 TAGLNQ01995 201 aaKnown RBP14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 ATP5G2Q06055 141 aa14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 RTL8BQ17RB0 113 aa14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 IDO2Q6ZQW0 420 aa14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 TEX45Q8NA69 505 aa14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 OR4A4PQ8NGN8 299 aa14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 WDR89Q96FK6 387 aaPredicted RBP14.62□□□□□ -0.07
SMPDL3A-202ENST00000487215 C2orf70A6NJV1 201 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 BET1O15155 118 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 FABP7O15540 132 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 RGS10O43665 173 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 TUSC2O75896 110 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 FOLR2P14207 255 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 KIR2DS2P43631 304 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 UBE2KP61086 200 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 MRPS15P82914 257 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 MLLT11Q13015 90 aaPredicted RBP14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 VMA21Q3ZAQ7 101 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 PLAC9Q5JTB6 97 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 OR56B1Q8NGI3 324 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 ACOT12Q8WYK0 555 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 KCTD12Q96CX2 325 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 GFI1Q99684 422 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 DUSP21Q9H596 190 aa14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 AK6Q9Y3D8 172 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-202ENST00000487215 PPP5D1E7EU14 171 aa14.6□□□□□ -0.07
SMPDL3A-202ENST00000487215 RRASP10301 218 aa14.6□□□□□ -0.07
SMPDL3A-202ENST00000487215 IGSF11Q5DX21 431 aa14.6□□□□□ -0.07
SMPDL3A-202ENST00000487215 TMEM91Q6ZNR0 172 aa14.6□□□□□ -0.07
SMPDL3A-202ENST00000487215 DDB2Q92466 427 aa14.6□□□□□ -0.07
SMPDL3A-202ENST00000487215 CABLES2Q9BTV7 478 aa14.6□□□□□ -0.07
SMPDL3A-202ENST00000487215 ACOT13Q9NPJ3 140 aa14.6□□□□□ -0.07
SMPDL3A-202ENST00000487215 DMRT1Q9Y5R6 373 aa14.6□□□□□ -0.07
SMPDL3A-202ENST00000487215 FRAS1Q86XX4 4008 aa14.6□□□□□ -0.07
SMPDL3A-202ENST00000487215 CRYZL1O95825 349 aa14.59□□□□□ -0.07
SMPDL3A-202ENST00000487215 HLA-AP01891 365 aaKnown RBP14.59□□□□□ -0.07
SMPDL3A-202ENST00000487215 NECAP1Q8NC96 275 aa14.59□□□□□ -0.07
SMPDL3A-202ENST00000487215 FAM3DQ96BQ1 224 aa14.59□□□□□ -0.07
SMPDL3A-202ENST00000487215 OVOL2Q9BRP0 275 aa14.59□□□□□ -0.07
SMPDL3A-202ENST00000487215 CCDC90BQ9GZT6 254 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms