RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 FAM90A24PP0C7X0 464 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 NPPCP23582 126 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 G6PCP35575 357 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 FASLGP48023 281 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 HYAL1Q12794 435 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 DTX1Q86Y01 620 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 SLC22A18ASQ8N1D0 253 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 OR52L2PQ8NGH6 319 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 KCNE4Q8WWG9 221 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 LRRC61Q9BV99 259 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 ZNF430Q9H8G1 570 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-209ENST00000487188 CD207Q9UJ71 328 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 OR5B21A6NL26 309 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 H0Y8G0 127 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 ZG16O60844 167 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 ZFAND5O76080 213 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 NUDT3O95989 172 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 CXorf1O96002 111 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 ESDP10768 282 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 GFRA1P56159 465 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 FGF12P61328 243 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 UBE2G1P62253 170 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 FXYD3Q14802 87 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 DEFB133Q30KQ1 61 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 GCSAMLQ5JQS6 135 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 OR10J3Q5JRS4 329 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 C10orf128Q5T292 105 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 C1orf185Q5T7R7 199 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 AMMECR1LQ6DCA0 310 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 SYT13Q7L8C5 426 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 AAED1Q7RTV5 226 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 FGFRL1Q8N441 504 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 OR1L3Q8NH93 324 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 UCN2Q96RP3 112 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 KCNIP1Q9NZI2 227 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 IL36RNQ9UBH0 155 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 MUC3AQ02505 3323 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 VCANP13611 3396 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 IGHV2-26A0A0B4J1V2 119 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 SPTY2D1-AS1A0A0U1RR47 76 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 A0A1W2PS18 150 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 TNFSF11O14788 317 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 AMY1AP04745 511 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 RPL31P62899 125 aaKnown RBP5.28□□□□□ -1.56
VPS13D-209ENST00000487188 TMEM14EPQ6UXP3 125 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 ZNF295-AS1Q8N0V1 137 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 ZNF441Q8N8Z8 693 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 GNB1LQ9BYB4 327 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 CSTL1Q9H114 145 aa5.28□□□□□ -1.56
VPS13D-209ENST00000487188 HEYLQ9NQ87 328 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-209ENST00000487188 G3V3Y1 287 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 CTRLP40313 264 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 LGALS4P56470 323 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 PSG4Q00888 419 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 FAM27BQ5VT28 67 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 C12orf54Q6X4T0 127 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 ASCL4Q6XD76 172 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 RPP25Q9BUL9 199 aaKnown RBP5.27□□□□□ -1.57
VPS13D-209ENST00000487188 CHODLQ9H9P2 273 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 MUC22E2RYF6 1773 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-209ENST00000487188 ATG2AQ2TAZ0 1938 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 IGKV1-6A0A0C4DH72 117 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 hCG_38984A0A1B0GV85 526 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 A0A1W2PQF6 199 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 LILRA5A6NI73 299 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 TIAF1O95411 115 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 FKBP2P26885 142 aaKnown RBP5.27□□□□□ -1.57
VPS13D-209ENST00000487188 OTX1P32242 354 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-209ENST00000487188 COMPP49747 757 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-209ENST00000487188 RAB31Q13636 194 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 MPV17L2Q567V2 206 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM240Q5SV17 173 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 Q6ZPA2 131 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 OR2Y1Q8NGV0 311 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 ZDHHC16Q969W1 377 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 RNF114Q9Y508 228 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 IGLC7A0M8Q6 106 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 GAGE10A6NGK3 116 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 OR2T8A6NH00 312 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 OR7C2O60412 319 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 CD1BP29016 333 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 ZNF83P51522 516 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 LINC00310P59036 64 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 SLC25A34Q6PIV7 304 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 DEFB119Q8N690 84 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 TSTD1Q8NFU3 115 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 OR5A2Q8NGI9 324 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 SSMEM1Q8WWF3 244 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 NABP1Q96AH0 204 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 ZNF488Q96MN9 340 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 RCHY1Q96PM5 261 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 STRADBQ9C0K7 418 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 ZNF407Q9C0G0 2248 aa5.27□□□□□ -1.57
VPS13D-209ENST00000487188 IGKV1-39P01597 117 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 IGKV1D-39P04432 117 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 LINC00869P0C866 280 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 RSPO1Q2MKA7 263 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-209ENST00000487188 CEACAM16Q2WEN9 425 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 MORN2Q502X0 79 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 LRRC10Q5BKY1 277 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms