RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 SFXN3Q9BWM7 321 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 GNB1LQ9BYB4 327 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 SRXN1Q9BYN0 137 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 CHODLQ9H9P2 273 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 RNF24Q9Y225 148 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 SAA2-SAA4A0A096LPE2 208 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 A0A0J9YW62 118 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 A0A1W2PPV4 95 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 SPINK4O60575 86 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 RAMP3O60896 148 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 VEGFBP49765 207 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 EDDM3BP56851 147 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 TMEM249Q2WGJ8 235 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 RAET1LQ5VY80 246 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 MMD2Q8IY49 270 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 FAM19A2Q8N3H0 131 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 OR2M7Q8NG81 312 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 CRISPLD2Q9H0B8 497 aa8.94□□□□□ -0.98
CCDC171-208ENST00000486641 CHCHD2Q9Y6H1 151 aaPredicted RBP8.94□□□□□ -0.98
CCDC171-208ENST00000486641 IGHV1OR21-1A0A087WYE8 117 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 IGHV2-26A0A0B4J1V2 119 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 LRRC30A6NM36 301 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 FAM166BA8MTA8 275 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 DKK1O94907 266 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 ARL14EPLP0DKL9 152 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 TNFSF4P23510 183 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 RPEL1Q2QD12 228 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 SPINK9Q5DT21 86 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 OR10J3Q5JRS4 329 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 OR8I2Q8N0Y5 310 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 DRAM1Q8N682 238 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 BADQ92934 168 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 FAM122AQ96E09 287 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 NAT8BQ9UHF3 227 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 IGLC7A0M8Q6 106 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 ODAMA1E959 279 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 ZNF324O75467 553 aaPredicted RBP8.93□□□□□ -0.98
CCDC171-208ENST00000486641 HTD2P86397 168 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 CEACAM21Q3KPI0 293 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 DCAF12Q5T6F0 453 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 ERASQ7Z444 233 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 CPT1CQ8TCG5 803 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 RLN3Q8WXF3 142 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 RAB1CQ92928 201 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 FOXB1Q99853 325 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 VPS25Q9BRG1 176 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 C1QTNF5Q9BXJ0 243 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 DLL3Q9NYJ7 618 aa8.93□□□□□ -0.98
CCDC171-208ENST00000486641 IGLV3-12A0A075B6K2 115 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 TRAV30A0A087WSZ9 112 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 TRBV9A0A0B4J1U6 114 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 NPIPB11E5RHQ5 1161 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 RRHO14718 337 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 LINC01565O15544 149 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 ZIC3O60481 467 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 CA2P00918 260 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 MYF5P13349 255 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 RAC1P63000 192 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 ZNF816Q0VGE8 651 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-208ENST00000486641 CEACAM16Q2WEN9 425 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 LCN12Q6JVE5 192 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 GCNT2Q8N0V5 402 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-208ENST00000486641 YTHDF2Q9Y5A9 579 aaKnown RBP8.92□□□□□ -0.98
CCDC171-208ENST00000486641 G3V3Y1 287 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 REG1AP05451 166 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 P0C879 139 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 CCNOP22674 350 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 VAMP3Q15836 100 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 SMIM15Q7Z3B0 74 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 PLXDC1Q8IUK5 500 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 NUDT10Q8NFP7 164 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 OR4F17Q8NGA8 305 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 TSKUQ8WUA8 353 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 DEPPQ9NTK1 212 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 V9GYV3 84 aa8.92□□□□□ -0.98
CCDC171-208ENST00000486641 KIAA1549Q9HCM3 1950 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 GTF3C1Q12789 2109 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 IGHV1-69-2A0A0G2JMI3 117 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 S1PR2O95136 353 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 CCL2P13500 99 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 S100A7P31151 101 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 RPL31P62899 125 aaKnown RBP8.91□□□□□ -0.98
CCDC171-208ENST00000486641 STUMQ69YW2 141 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 SLC23A3Q6PIS1 610 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 TMEM136Q6ZRR5 245 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 SPOCK3Q9BQ16 436 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 TXNDC17Q9BRA2 123 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 ZPBPQ9BS86 351 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 CLEC7AQ9BXN2 247 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 DEFB126Q9BYW3 111 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 CDC42EP3Q9UKI2 254 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 STAG3L2P0CL84 134 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 STAG3L3P0CL85 134 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 NTF3P20783 257 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 COL8A2P25067 703 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 CD1BP29016 333 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 SRIP30626 198 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 SRD5A2P31213 254 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 RPL30P62888 115 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms