RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 RELAQ04206 551 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 ZNF791Q3KP31 576 aaPredicted RBP1.14□□□□□ -2.23
LTN1-206ENST00000486427 EURLQ9NYK6 297 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 HHLA3Q9XRX5 114 aa1.14□□□□□ -2.23
LTN1-206ENST00000486427 POLR3HQ9Y535 204 aaPredicted RBP1.14□□□□□ -2.23
LTN1-206ENST00000486427 DICER1Q9UPY3 1922 aaKnown RBP1.14□□□□□ -2.23
LTN1-206ENST00000486427 FABP12A6NFH5 140 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 ATP8B1O43520 1251 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 HPGDSO60760 199 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 IL6P05231 212 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 BPGMP07738 259 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 RPL27AP46776 148 aaKnown RBP1.13□□□□□ -2.23
LTN1-206ENST00000486427 GABRA2P47869 451 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 HOXC5Q00444 222 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 MGAT3Q09327 533 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 FAM201AQ5SY85 155 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 OR10K2Q6IF99 312 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 SLC35E3Q7Z769 313 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 FUNDC1Q8IVP5 155 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 ASB17Q8WXJ9 295 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 SFRP2Q96HF1 295 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 ZNF514Q96K75 400 aaPredicted RBP1.13□□□□□ -2.23
LTN1-206ENST00000486427 CFAP53Q96M91 514 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 PACRGQ96M98 296 aaPredicted RBP1.13□□□□□ -2.23
LTN1-206ENST00000486427 TIPINQ9BVW5 301 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 MRPL32Q9BYC8 188 aaKnown RBP1.13□□□□□ -2.23
LTN1-206ENST00000486427 TMEM222Q9H0R3 208 aa1.13□□□□□ -2.23
LTN1-206ENST00000486427 GRIN2BQ13224 1484 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 ABCC12Q96J65 1359 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 LINC00854A0A1B0GVQ3 168 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 RFPL4AA6NLU0 287 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 A8MUN3 132 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 RFPL4AL1F8VTS6 287 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 CALUO43852 315 aaPredicted RBP1.12□□□□□ -2.23
LTN1-206ENST00000486427 CDK9P50750 372 aaKnown RBP1.12□□□□□ -2.23
LTN1-206ENST00000486427 TBPL1P62380 186 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 FKBP1AP62942 108 aaKnown RBP1.12□□□□□ -2.23
LTN1-206ENST00000486427 HLA-DRB3P79483 266 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 PLPPR5Q32ZL2 321 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 COA5Q86WW8 74 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 GPHB5Q86YW7 130 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 SMIM19Q96E16 107 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 SPANXB1Q9NS25 103 aaPredicted RBP1.12□□□□□ -2.23
LTN1-206ENST00000486427 IMP3Q9NV31 184 aaKnown RBP1.12□□□□□ -2.23
LTN1-206ENST00000486427 DOK5Q9P104 306 aa1.12□□□□□ -2.23
LTN1-206ENST00000486427 IGHV3-64A0A075B6Q5 118 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 TRGV2A0A075B6R0 118 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 TMED7-TICAM2A0A0A6YYA0 188 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 IGKV1D-43A0A0B4J1Z2 117 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 C5orf49A4QMS7 147 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 C9JCJ5 164 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 BIRC5O15392 142 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 C1QCP02747 245 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 OCMP0CE72 109 aaPredicted RBP1.11□□□□□ -2.23
LTN1-206ENST00000486427 IFNGR2P38484 337 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 UBE2G2P60604 165 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 CXCR4P61073 352 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 GNA12Q03113 381 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 PACRGLQ8N7B6 248 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 NMNAT3Q96T66 252 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 DHRS9Q9BPW9 319 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 C7orf50Q9BRJ6 194 aaKnown RBP1.11□□□□□ -2.23
LTN1-206ENST00000486427 DCUN1D5Q9BTE7 237 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 TTTY13Q9BZ97 58 aa1.11□□□□□ -2.23
LTN1-206ENST00000486427 FN1P02751 2386 aaKnown RBP1.11□□□□□ -2.23
LTN1-206ENST00000486427 F5H768 121 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 NAPSAO96009 420 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 ZNF705DP0CH99 300 aaPredicted RBP1.1□□□□□ -2.23
LTN1-206ENST00000486427 ZNF705BP0CI00 300 aaPredicted RBP1.1□□□□□ -2.23
LTN1-206ENST00000486427 EMP2P54851 167 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 C10orf126Q8N4M7 172 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 OR51T1Q8NGJ9 327 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 ZNF675Q8TD23 568 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 DNAJB3Q8WWF6 145 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 TMEM109Q9BVC6 243 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 SPZ1Q9BXG8 430 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 DERL2Q9GZP9 239 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 HES4Q9HCC6 221 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 BABAM2Q9NXR7 383 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 TAAR3PQ9P1P4 343 aa1.1□□□□□ -2.23
LTN1-206ENST00000486427 TXNDC9O14530 226 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 COCHO43405 550 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 PGLYRP1O75594 196 aaPredicted RBP1.09□□□□□ -2.23
LTN1-206ENST00000486427 APOMO95445 188 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 HLA-DQB2P05538 268 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 CTBP2P56545 445 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 TMEM258P61165 79 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 SKP1P63208 163 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 GLO1Q04760 184 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 SLC38A11Q08AI6 406 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 JOSD1Q15040 202 aaPredicted RBP1.09□□□□□ -2.23
LTN1-206ENST00000486427 MIAQ16674 131 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 PLEKHG7Q6ZR37 379 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 LRRC28Q86X40 367 aaPredicted RBP1.09□□□□□ -2.23
LTN1-206ENST00000486427 OR1L8Q8NGR8 309 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 OR13C8Q8NGS7 320 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 EEF1AKMT1Q8WVE0 214 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 ANKRD36BP1Q96IX9 119 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 CCL13Q99616 98 aa1.09□□□□□ -2.23
LTN1-206ENST00000486427 NAA38Q9BRA0 125 aaKnown RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms