RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SHOXO15266 292 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 NBR2O15453 112 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 FGF16O43320 207 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 IGLV2-14P01704 120 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 ZNF735P0CB33 412 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 LINC00205P59089 165 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 SURF2Q15527 256 aaPredicted RBP9.1□□□□□ -0.95
NUP50-216ENST00000486184 C9orf152Q5JTZ5 239 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.1□□□□□ -0.95
NUP50-216ENST00000486184 OR13C8Q8NGS7 320 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 OR4F5Q8NH21 305 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 MARCH1Q8TCQ1 289 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 HARBI1Q96MB7 349 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 TSNAXQ99598 290 aaKnown RBP9.1□□□□□ -0.95
NUP50-216ENST00000486184 SDHCQ99643 169 aaPredicted RBP9.1□□□□□ -0.95
NUP50-216ENST00000486184 RNF5Q99942 180 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 C7orf50Q9BRJ6 194 aaKnown RBP9.1□□□□□ -0.95
NUP50-216ENST00000486184 PRSS22Q9GZN4 317 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 RANBP3Q9H6Z4 567 aaPredicted RBP9.1□□□□□ -0.95
NUP50-216ENST00000486184 LIN7CQ9NUP9 197 aaKnown RBP9.1□□□□□ -0.95
NUP50-216ENST00000486184 SLC2A8Q9NY64 477 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 COPZ2Q9P299 210 aa9.1□□□□□ -0.95
NUP50-216ENST00000486184 PGLYRP1O75594 196 aaPredicted RBP9.09□□□□□ -0.95
NUP50-216ENST00000486184 CRYZL1O95825 349 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 SMCPP49901 116 aaPredicted RBP9.09□□□□□ -0.95
NUP50-216ENST00000486184 RAG2P55895 527 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 KRTAP24-1Q3LI83 254 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 VMA21Q3ZAQ7 101 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 SPAG16Q8N0X2 631 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 Q8N6K4 173 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 OR2T6Q8NHC8 308 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 OSR1Q8TAX0 266 aaPredicted RBP9.09□□□□□ -0.95
NUP50-216ENST00000486184 CD300LFQ8TDQ1 290 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 DDB2Q92466 427 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 GPHA2Q96T91 129 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 SLC2A9Q9NRM0 540 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 PGPEP1Q9NXJ5 209 aa9.09□□□□□ -0.95
NUP50-216ENST00000486184 TEX13DA0A0J9YY54 714 aaPredicted RBP9.08□□□□□ -0.96
NUP50-216ENST00000486184 NDUFA7O95182 113 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 SPDEFO95238 335 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 IGKV1-16P04430 117 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 CTSDP07339 412 aaPredicted RBP9.08□□□□□ -0.96
NUP50-216ENST00000486184 HKR1P10072 659 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 PI3P19957 117 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 LGALS7P47929 136 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 F2RL1P55085 397 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 PIGPP57054 158 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 RPL30P62888 115 aaKnown RBP9.08□□□□□ -0.96
NUP50-216ENST00000486184 FOXL1Q12952 345 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 EIF4EBP1Q13541 118 aaPredicted RBP9.08□□□□□ -0.96
NUP50-216ENST00000486184 FBLN7Q53RD9 439 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 TMEM177Q53S58 311 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 C11orf88Q6PI97 169 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 TBC1D26Q86UD7 250 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 TCTEX1D1Q8N7M0 179 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 C5orf56Q8N8D9 126 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 SLC25A21Q9BQT8 299 aaPredicted RBP9.08□□□□□ -0.96
NUP50-216ENST00000486184 AIFM2Q9BRQ8 373 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 C19orf24Q9BVV8 132 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 BEX1Q9HBH7 125 aa9.08□□□□□ -0.96
NUP50-216ENST00000486184 RRHO14718 337 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 RBFOX2O43251 390 aaKnown RBP eCLIP9.07□□□□□ -0.96
NUP50-216ENST00000486184 LYRM1O43325 122 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 UPK1BO75841 260 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 HPRT1P00492 218 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 HRASP01112 189 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 F2RP25116 425 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 CNTFRP26992 372 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 ERVK-16P61578 105 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 RND3P61587 244 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 RBMS2Q15434 407 aaKnown RBP9.07□□□□□ -0.96
NUP50-216ENST00000486184 MZT2BQ6NZ67 158 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 Q6ZSV7 163 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 Q8N9W7 124 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 NPBQ8NG41 125 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 RBMXL1Q96E39 390 aaKnown RBP9.07□□□□□ -0.96
NUP50-216ENST00000486184 TSC22D3Q99576 134 aa9.07□□□□□ -0.96
NUP50-216ENST00000486184 METTL1Q9UBP6 276 aaKnown RBP9.07□□□□□ -0.96
NUP50-216ENST00000486184 A0A1B0GUS0 222 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 SH2D7A6NKC9 451 aaPredicted RBP9.06□□□□□ -0.96
NUP50-216ENST00000486184 MPPED1O15442 326 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 KCNAB3O43448 404 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 SLC25A17O43808 307 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 CREBL2O60519 120 aaPredicted RBP9.06□□□□□ -0.96
NUP50-216ENST00000486184 TSPAN9O75954 239 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 NDUFA3O95167 84 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 SERPINE2P07093 398 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 VDAC2P45880 294 aaPredicted RBP9.06□□□□□ -0.96
NUP50-216ENST00000486184 DEFA1P59665 94 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 DEFA3P59666 94 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 BLCAPP62952 87 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 PSG5Q15238 335 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 C5orf64Q2M2E5 130 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 LIN54Q6MZP7 749 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 TMED4Q7Z7H5 227 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 SGPP2Q8IWX5 399 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 FAM71E2Q8N5Q1 922 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 VSTM2AQ8TAG5 236 aa9.06□□□□□ -0.96
NUP50-216ENST00000486184 TAF15Q92804 592 aaKnown RBP eCLIP9.06□□□□□ -0.96
NUP50-216ENST00000486184 MRGPRFQ96AM1 343 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms