RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TMEM229BQ8NBD8 167 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 ZBTB34Q8NCN2 500 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 OR4D10Q8NGI6 311 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 OR6Q1Q8NGQ2 317 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 NOL4LQ96MY1 436 aaPredicted RBP9.37□□□□□ -0.91
HPS4-214ENST00000485842 CLCC1Q96S66 551 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 RNF5Q99942 180 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 CITED1Q99966 193 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 SOSTQ9BQB4 213 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 WNT10AQ9GZT5 417 aa9.37□□□□□ -0.91
HPS4-214ENST00000485842 METTL1Q9UBP6 276 aaKnown RBP9.37□□□□□ -0.91
HPS4-214ENST00000485842 AP4M1O00189 453 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 GSTZ1O43708 216 aaPredicted RBP9.36□□□□□ -0.91
HPS4-214ENST00000485842 FBXO24O75426 580 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 SPDEFO95238 335 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 HLA-DRB1P01911 266 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 RLN1P04808 185 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 GNRHRP30968 328 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 PPP5CP53041 499 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 CATR1Q13166 79 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 EIF4EBP1Q13541 118 aaPredicted RBP9.36□□□□□ -0.91
HPS4-214ENST00000485842 SCGB2B2Q4G0G5 96 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 TMEM177Q53S58 311 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 SPANXN2Q5MJ10 180 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 AADACL3Q5VUY0 350 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 LIN54Q6MZP7 749 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 FAAP20Q6NZ36 180 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 STEAP1BQ6NZ63 245 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 CENPVQ7Z7K6 275 aaPredicted RBP9.36□□□□□ -0.91
HPS4-214ENST00000485842 OR51H1Q8NH63 302 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 OR4S2Q8NH73 311 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 ABHD5Q8WTS1 349 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 BORCS5Q969J3 196 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 PARP11Q9NR21 331 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 TPSG1Q9NRR2 321 aa9.36□□□□□ -0.91
HPS4-214ENST00000485842 IGHV7-81A0A0B4J1V7 117 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 PSMB11A5LHX3 300 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 GPR31O00270 319 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 ATP6V0E1O15342 81 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 IGLV2-23P01705 113 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 CD74P04233 296 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 CD28P10747 220 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 PGAM2P15259 253 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 KIR2DS2P43631 304 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 LGALS7P47929 136 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 ZNF79Q15937 498 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 VMA21Q3ZAQ7 101 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 PHLDA2Q53GA4 152 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 TET2Q6N021 2002 aaPredicted RBP9.35□□□□□ -0.91
HPS4-214ENST00000485842 C10orf99Q6UWK7 81 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 STPG2Q8N412 459 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 ARRDC1Q8N5I2 433 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 OR5AU1Q8NGC0 362 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 OR4C16Q8NGL9 310 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 CHPT1Q8WUD6 406 aa9.35□□□□□ -0.91
HPS4-214ENST00000485842 THAP7Q9BT49 309 aaPredicted RBP9.35□□□□□ -0.91
HPS4-214ENST00000485842 A6NHS1 94 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 SRRM4A7MD48 611 aaKnown RBP9.34□□□□□ -0.91
HPS4-214ENST00000485842 DISC1C4P0D8 188 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 FCN1O00602 326 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 CA2P00918 260 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 AKAIN1P0CW23 69 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 GNB1P62873 340 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 SLC35B1P78383 322 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 NDPQ00604 133 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 MEF2DQ14814 521 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 KHDC1LQ5JSQ8 128 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 LPCAT3Q6P1A2 487 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 ZNF329Q86UD4 541 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 CMTM1Q8IZ96 169 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 SPAG16Q8N0X2 631 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 Q8N402 240 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 OSR1Q8TAX0 266 aaPredicted RBP9.34□□□□□ -0.91
HPS4-214ENST00000485842 WIPF2Q8TF74 440 aaPredicted RBP9.34□□□□□ -0.91
HPS4-214ENST00000485842 OR51J1Q9H342 316 aa9.34□□□□□ -0.91
HPS4-214ENST00000485842 ANKRD20A5PA0PJZ0 165 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 PLXNB1O43157 2135 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 RAMP3O60896 148 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 PGLYRP1O75594 196 aaPredicted RBP9.33□□□□□ -0.92
HPS4-214ENST00000485842 SAA1P0DJI8 122 aaPredicted RBP9.33□□□□□ -0.92
HPS4-214ENST00000485842 VDAC1P21796 283 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 PTBP1P26599 531 aaKnown RBP eCLIP9.33□□□□□ -0.92
HPS4-214ENST00000485842 S100GP29377 79 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 ETV6P41212 452 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 BRWD1-AS2P59051 145 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 CX3CL1P78423 397 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 PJVKQ0ZLH3 352 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 ECSCRQ19T08 205 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 CNPY1Q3B7I2 92 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 IDO2Q6ZQW0 420 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 SSX9Q7RTT3 188 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 LHFPL1Q86WI0 220 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 SLC38A6Q8IZM9 456 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 VKORC1L1Q8N0U8 176 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 POC5Q8NA72 575 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 OR4X2Q8NGF9 303 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 TRIM63Q969Q1 353 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 CITED2Q99967 270 aaPredicted RBP9.33□□□□□ -0.92
HPS4-214ENST00000485842 RSRP1Q9BUV0 290 aa9.33□□□□□ -0.92
HPS4-214ENST00000485842 MCUBQ9NWR8 336 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms