RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 DRAXINQ8NBI3 349 aaPredicted RBP6.61□□□□□ -1.35
SF3A1-208ENST00000485618 BVESQ8NE79 360 aa6.61□□□□□ -1.35
SF3A1-208ENST00000485618 SGMS2Q8NHU3 365 aa6.61□□□□□ -1.35
SF3A1-208ENST00000485618 VSTM2AQ8TAG5 236 aa6.61□□□□□ -1.35
SF3A1-208ENST00000485618 LIN7CQ9NUP9 197 aaKnown RBP6.61□□□□□ -1.35
SF3A1-208ENST00000485618 MCUBQ9NWR8 336 aa6.61□□□□□ -1.35
SF3A1-208ENST00000485618 COPZ2Q9P299 210 aa6.61□□□□□ -1.35
SF3A1-208ENST00000485618 C14orf166Q9Y224 244 aaKnown RBP6.61□□□□□ -1.35
SF3A1-208ENST00000485618 RNF114Q9Y508 228 aa6.61□□□□□ -1.35
SF3A1-208ENST00000485618 FCGR3BO75015 233 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 SERPINE2P07093 398 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 CD40LGP29965 261 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 GNRHRP30968 328 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 VDAC2P45880 294 aaPredicted RBP6.6□□□□□ -1.35
SF3A1-208ENST00000485618 ERVK-16P61578 105 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 SLC35B1P78383 322 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 ZNF846Q147U1 533 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 AADACL3Q5VUY0 350 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 ZNF660Q6AZW8 331 aaPredicted RBP6.6□□□□□ -1.35
SF3A1-208ENST00000485618 CCBE1Q6UXH8 406 aaPredicted RBP6.6□□□□□ -1.35
SF3A1-208ENST00000485618 CENPVQ7Z7K6 275 aaPredicted RBP6.6□□□□□ -1.35
SF3A1-208ENST00000485618 ZNF383Q8NA42 475 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 NPBQ8NG41 125 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 SLC25A21Q9BQT8 299 aaPredicted RBP6.6□□□□□ -1.35
SF3A1-208ENST00000485618 C7orf50Q9BRJ6 194 aaKnown RBP6.6□□□□□ -1.35
SF3A1-208ENST00000485618 CCDC32Q9BV29 185 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 WDR12Q9GZL7 423 aaKnown RBP6.6□□□□□ -1.35
SF3A1-208ENST00000485618 TINAGL1Q9GZM7 467 aaPredicted RBP6.6□□□□□ -1.35
SF3A1-208ENST00000485618 CCL28Q9NRJ3 127 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 FAM212BQ9NTI7 297 aaPredicted RBP6.6□□□□□ -1.35
SF3A1-208ENST00000485618 KCNIP3Q9Y2W7 256 aa6.6□□□□□ -1.35
SF3A1-208ENST00000485618 IGKV1D-13A0A0B4J2D9 117 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 AP4M1O00189 453 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 RRHO14718 337 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 CHST1O43916 411 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 PGLYRP1O75594 196 aaPredicted RBP6.59□□□□□ -1.35
SF3A1-208ENST00000485618 CNIH1O95406 144 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 CRYZL1O95825 349 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 HPRT1P00492 218 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 IGKV1-13P0DP09 117 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 BLCAPP62952 87 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 TMEM267Q0VDI3 215 aaPredicted RBP6.59□□□□□ -1.35
SF3A1-208ENST00000485618 C5orf64Q2M2E5 130 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 TMEM177Q53S58 311 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 SHISA2Q6UWI4 295 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 GLDNQ6ZMI3 551 aaPredicted RBP6.59□□□□□ -1.35
SF3A1-208ENST00000485618 IDO2Q6ZQW0 420 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 Q6ZSV7 163 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 SLC35E3Q7Z769 313 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 SPAG16Q8N0X2 631 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 Q8N2B8 174 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 Q8N6K4 173 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 C5orf56Q8N8D9 126 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 TEX45Q8NA69 505 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 LINC01006Q8NI28 216 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 CHPT1Q8WUD6 406 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 HARBI1Q96MB7 349 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 RSRP1Q9BUV0 290 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 SRRQ9GZT4 340 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 PLEKHA2Q9HB19 425 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 SLC2A8Q9NY64 477 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 METTL1Q9UBP6 276 aaKnown RBP6.59□□□□□ -1.35
SF3A1-208ENST00000485618 V9GYH0 126 aa6.59□□□□□ -1.35
SF3A1-208ENST00000485618 TGP01266 2768 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 TEX13DA0A0J9YY54 714 aaPredicted RBP6.58□□□□□ -1.36
SF3A1-208ENST00000485618 MPPED1O15442 326 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 TNFSF12O43508 249 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 HLA-DRB1P01911 266 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 CTSDP07339 412 aaPredicted RBP6.58□□□□□ -1.36
SF3A1-208ENST00000485618 ANXA3P12429 323 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 RPA2P15927 270 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 NQO2P16083 231 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 F2RP25116 425 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 PPP5CP53041 499 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 F2RL1P55085 397 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 TAS2R31P59538 309 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 UBE2KP61086 200 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 RND3P61587 244 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 PSG5Q15238 335 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 ZNF79Q15937 498 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 PHLDA2Q53GA4 152 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 AWAT1Q58HT5 328 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 MZT2BQ6NZ67 158 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 ZNF562Q6V9R5 426 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 ZNF818PQ6ZRF7 136 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 PPP1R27Q86WC6 154 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 LHFPL1Q86WI0 220 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 COMMD1Q8N668 190 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 Q8N9W7 124 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 OR51S1Q8NGJ8 323 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 OR4C16Q8NGL9 310 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 OR51H1Q8NH63 302 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 OR4A5Q8NH83 315 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 DDB2Q92466 427 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 PLSCR3Q9NRY6 295 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 CACFD1Q9UGQ2 172 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 PKD1L1Q8TDX9 2849 aa6.58□□□□□ -1.36
SF3A1-208ENST00000485618 SLC25A17O43808 307 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 PROP1O75360 226 aa6.57□□□□□ -1.36
SF3A1-208ENST00000485618 SNAPC5O75971 98 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms