RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 MIDNQ504T8 468 aa16.55■□□□□ 0.24
VCPKMT-203ENST00000484763 CIARTQ8N365 385 aaPredicted RBP16.55■□□□□ 0.24
VCPKMT-203ENST00000484763 PDCD10Q9BUL8 212 aa16.55■□□□□ 0.24
VCPKMT-203ENST00000484763 PLEKHA2Q9HB19 425 aa16.55■□□□□ 0.24
VCPKMT-203ENST00000484763 C13orf42A0A1B0GVH6 325 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 ATG12O94817 140 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 GIPP09681 153 aaPredicted RBP16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 RRASP10301 218 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 VDAC1P21796 283 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 AKR1C2P52895 323 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 DHRS7BQ6IAN0 325 aaPredicted RBP16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 ASB13Q8WXK3 278 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 CHIAQ9BZP6 476 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 COMMD9Q9P000 198 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 ITGB1BP2Q9UKP3 347 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 NPFFO15130 113 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 OR2A4O95047 310 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 CRYZL1O95825 349 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 CD300CQ08708 224 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 GPR157Q5UAW9 335 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 RNASE11Q8TAA1 199 aaKnown RBP16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 FYTTD1Q96QD9 318 aaKnown RBP16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 OR2A7Q96R45 310 aa16.54■□□□□ 0.24
VCPKMT-203ENST00000484763 IGHV1-69DA0A0B4J2H0 117 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 A0A1W2PPI3 338 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 MPTX1A8MV57 137 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 OOSP1A8MZH6 123 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 H7C2Y5 167 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 SMAD7O15105 426 aaKnown RBP16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 IGHV1-69P01742 117 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 MC5RP33032 325 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 SAA4P35542 130 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 RAB13P51153 203 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 CCDC144NLQ6NUI1 221 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 PDPNQ86YL7 162 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 OR8H3Q8N146 312 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 LSM10Q969L4 123 aaKnown RBP16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 WASHC3Q9Y3C0 194 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 HILPDAQ9Y5L2 63 aa16.53■□□□□ 0.24
VCPKMT-203ENST00000484763 NMSQ5H8A3 153 aa16.52■□□□□ 0.24
VCPKMT-203ENST00000484763 MOB3BQ86TA1 216 aa16.52■□□□□ 0.24
VCPKMT-203ENST00000484763 RRNAD1Q96FB5 475 aaKnown RBP16.52■□□□□ 0.24
VCPKMT-203ENST00000484763 SEC22AQ96IW7 307 aa16.52■□□□□ 0.24
VCPKMT-203ENST00000484763 OR10C1Q96KK4 312 aa16.52■□□□□ 0.24
VCPKMT-203ENST00000484763 ZANQ9Y493 2812 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 MARCH11A6NNE9 402 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 KRASP01116 189 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 AVPP01185 164 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 IGKV1-5P01602 117 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 IGKV1-16P04430 117 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 RAP2BP61225 183 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 SRSF4Q08170 494 aaKnown RBP16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 IAH1Q2TAA2 248 aaPredicted RBP16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 TCTE3Q8IZS6 198 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 R3HDM4Q96D70 268 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 MALSU1Q96EH3 234 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 SPIN2AQ99865 258 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 SPIN2BQ9BPZ2 258 aa16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 FLNAP21333 2647 aaKnown RBP16.52■□□□□ 0.23
VCPKMT-203ENST00000484763 IGHV4-38-2P0DP08 117 aa16.51■□□□□ 0.23
VCPKMT-203ENST00000484763 NQO2P16083 231 aa16.51■□□□□ 0.23
VCPKMT-203ENST00000484763 G6PCP35575 357 aa16.51■□□□□ 0.23
VCPKMT-203ENST00000484763 SSX2Q16385 188 aa16.51■□□□□ 0.23
VCPKMT-203ENST00000484763 FAM219AQ8IW50 185 aa16.51■□□□□ 0.23
VCPKMT-203ENST00000484763 PIP4P2Q8N4L2 257 aa16.51■□□□□ 0.23
VCPKMT-203ENST00000484763 C2orf50Q96LR7 162 aa16.51■□□□□ 0.23
VCPKMT-203ENST00000484763 NMES1Q9C002 83 aa16.51■□□□□ 0.23
VCPKMT-203ENST00000484763 IGHV3OR16-10A0A075B7F0 116 aa16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 ERVK-16P61578 105 aa16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 CYCSP99999 105 aaKnown RBP16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 OR4C13Q8NGP0 309 aa16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 OSR1Q8TAX0 266 aaPredicted RBP16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 C17orf50Q8WW18 174 aa16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 RANBP3Q9H6Z4 567 aaPredicted RBP16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 MMP24Q9Y5R2 645 aa16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 ZNF469Q96JG9 3925 aaPredicted RBP16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 NOTCH2Q04721 2471 aa16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 ABCA1O95477 2261 aa16.5■□□□□ 0.23
VCPKMT-203ENST00000484763 IGHV3-72A0A0B4J1Y9 119 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 A0A0G2JRQ6 117 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 TIMM23O14925 209 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 HRASP01112 189 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 TMEM177Q53S58 311 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 RUSC1-AS1Q66K80 236 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 THOC7Q6I9Y2 204 aaKnown RBP16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 DYNAPQ8N1N2 210 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 DMBX1Q8NFW5 382 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 FLYWCH2Q96CP2 140 aaKnown RBP16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 WDR89Q96FK6 387 aaPredicted RBP16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 ARHGDIBP52566 201 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 HABP2Q14520 560 aaPredicted RBP16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 BRD3OSQ6XYD6 125 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 ZBTB8BQ8NAP8 495 aaPredicted RBP16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 OR2T35Q8NGX2 323 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 GPR146Q96CH1 333 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 AJUBAQ96IF1 538 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 HARBI1Q96MB7 349 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 SVEP1Q4LDE5 3571 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 MYO9AB2RTY4 2548 aa16.49■□□□□ 0.23
VCPKMT-203ENST00000484763 SHOXO15266 292 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms