RNA–Protein interactions for RNA: ENST00000484746.1

ATP2B4-207, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best)

Gene ATP2B4, Length 4,697 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-207ENST00000484746 FAM90A1Q86YD7 464 aa4.79□□□□□ -1.64
ATP2B4-207ENST00000484746 TMEM147Q9BVK8 224 aa4.79□□□□□ -1.64
ATP2B4-207ENST00000484746 SH3BGRL3Q9H299 93 aa4.79□□□□□ -1.64
ATP2B4-207ENST00000484746 MSRB2Q9Y3D2 182 aa4.79□□□□□ -1.64
ATP2B4-207ENST00000484746 NBEAQ8NFP9 2946 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 IGHV1-18A0A0C4DH31 117 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 WNT9BO14905 357 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 SIAH2O43255 324 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CIDEAO60543 219 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 MBPP02686 304 aaPredicted RBP4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CXCL1P09341 107 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 GNB1P62873 340 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 EWSR1Q01844 656 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 TMEM187Q14656 261 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 ZNF645Q8N7E2 425 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 VPS25Q9BRG1 176 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 ABHD14AQ9BUJ0 271 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CALYQ9NYX4 217 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 JPT1Q9UK76 154 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 EML5Q05BV3 1969 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 IGKV1-12A0A0C4DH73 117 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 E9PLN8 166 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 RAB29O14966 203 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 HPRT1P00492 218 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 IGKV1D-12P01611 117 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 COX7A1P24310 79 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 GLIPR1P48060 266 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 DYNLT3P51808 116 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 QRFPP83859 136 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 RNF166Q96A37 237 aaPredicted RBP4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 GALNT14Q96FL9 552 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 VKORC1Q9BQB6 163 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 GNG13Q9P2W3 67 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CLN8Q9UBY8 286 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CEP192Q8TEP8 1941 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 DEDDO75618 318 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CYB5R3P00387 301 aaPredicted RBP4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CT45A6P0DMU7 189 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CT45A5P0DMU8 189 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CT45A7P0DMV0 189 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 APOBEC3AP31941 199 aaPredicted RBP4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 TAS2R45P59539 299 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 RND3P61587 244 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CT45A1Q5HYN5 189 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 C10orf91Q5T1B1 145 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 TGIF2LYQ8IUE0 185 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 SELENOHQ8IZQ5 122 aaKnown RBP4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 NECAP1Q8NC96 275 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CT45A3Q8NHU0 189 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 ZNF714Q96N38 554 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 ATP5SQ99766 215 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 ELOVL1Q9BW60 279 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 UBTD1Q9HAC8 227 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 OR1A1Q9P1Q5 309 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 IGKV1-27A0A075B6S5 117 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 A8MWP6 167 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 F6UZH7 168 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 K7N7A8 449 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 APC2O95996 2303 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 GAPDHP04406 335 aaKnown RBP4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CD5P06127 495 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 G6PCP35575 357 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 GNB2P62879 340 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 COLCA1Q6ZS62 124 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 MRPL30Q8TCC3 161 aaKnown RBP4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 RTBDNQ9BSG5 229 aaPredicted RBP4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 TUBA4BQ9H853 241 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 ZNF355PQ9NSJ1 428 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 CBLN4Q9NTU7 201 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 IDI2-AS1Q9NZ38 188 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 PRNDQ9UKY0 176 aa4.78□□□□□ -1.64
ATP2B4-207ENST00000484746 ELOA3CA0A087WX78 387 aaPredicted RBP4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 F8VVB4 439 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 F8VWA3 439 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST1H2BKO60814 126 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST1H2BJP06899 126 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST1H2BOP23527 126 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST1H2BBP33778 126 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 RPL29P47914 159 aaKnown RBP4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST1H2BDP58876 126 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST1H2BCP62807 126 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST2H2BEQ16778 126 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 ZNF818PQ6ZRF7 136 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST1H2BHQ93079 126 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 SNRNP40Q96DI7 357 aaKnown RBP4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST1H2BNQ99877 126 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 HIST1H2BMQ99879 126 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 IL36RNQ9UBH0 155 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 SLC25A15Q9Y619 301 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 PTBP3O95758 552 aaKnown RBP4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 SEC11BP0C7V7 166 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 SLC25A6P12236 298 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 ERVFRD-1P60508 538 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 BSPH1Q075Z2 132 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 H1FOOQ8IZA3 346 aaPredicted RBP4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 LINC01560Q8TB33 94 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 Q8WTZ3 238 aa4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 RNASE6Q93091 150 aaKnown RBP4.77□□□□□ -1.65
ATP2B4-207ENST00000484746 SMIM8Q96KF7 97 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms