RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ARPC1AQ92747 370 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 MS4A10Q96PG2 267 aa9.56□□□□□ -0.88
MSH5-216ENST00000484309 NAA50Q9GZZ1 169 aaKnown RBP9.56□□□□□ -0.88
MSH5-216ENST00000484309 ALX4Q9H161 411 aaPredicted RBP9.56□□□□□ -0.88
MSH5-216ENST00000484309 FOXA2Q9Y261 457 aaPredicted RBP9.56□□□□□ -0.88
MSH5-216ENST00000484309 A0A0A6YYH2 397 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 A6NJ64 397 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 SRRM4A7MD48 611 aaKnown RBP9.55□□□□□ -0.88
MSH5-216ENST00000484309 CNIH1O95406 144 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 HLA-DQB1P01920 261 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 CRIP2P52943 208 aaPredicted RBP9.55□□□□□ -0.88
MSH5-216ENST00000484309 RPL30P62888 115 aaKnown RBP9.55□□□□□ -0.88
MSH5-216ENST00000484309 SSBP2P81877 361 aaPredicted RBP9.55□□□□□ -0.88
MSH5-216ENST00000484309 FXYD3Q14802 87 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 TMEM177Q53S58 311 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 ACTBL2Q562R1 376 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 ZNF562Q6V9R5 426 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 IDO2Q6ZQW0 420 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 KCTD9Q7L273 389 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 HOGA1Q86XE5 327 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 OR13F1Q8NGS4 319 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 S100A16Q96FQ6 103 aaKnown RBP9.55□□□□□ -0.88
MSH5-216ENST00000484309 UBE2E2Q96LR5 201 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 GPHA2Q96T91 129 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 VSIG4Q9Y279 399 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 RBMX2Q9Y388 322 aaKnown RBP9.55□□□□□ -0.88
MSH5-216ENST00000484309 NUBP2Q9Y5Y2 271 aa9.55□□□□□ -0.88
MSH5-216ENST00000484309 XRCC3O43542 346 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 FCGR3BO75015 233 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 DUS4LO95620 317 aaKnown RBP9.54□□□□□ -0.88
MSH5-216ENST00000484309 IGLV2-14P01704 120 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 IGHV3-11P01762 117 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 EIF4EP06730 217 aaKnown RBP9.54□□□□□ -0.88
MSH5-216ENST00000484309 CRYGBP07316 175 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 APELAP0DMC3 54 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 AADACP22760 399 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 FCGR2CP31995 323 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 LGALS7P47929 136 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 TAS2R20P59543 309 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 DEFA5Q01523 94 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 TAGLNQ01995 201 aaKnown RBP9.54□□□□□ -0.88
MSH5-216ENST00000484309 TMEM267Q0VDI3 215 aaPredicted RBP9.54□□□□□ -0.88
MSH5-216ENST00000484309 TMEM69Q5SWH9 247 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 REC114Q7Z4M0 266 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 SECTM1Q8WVN6 248 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 SNAPC3Q92966 411 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 SLC25A46Q96AG3 418 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 ADTRPQ96IZ2 230 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 DCUN1D5Q9BTE7 237 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 IFT46Q9NQC8 304 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 ZNF355PQ9NSJ1 428 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 TAS2R8Q9NYW2 309 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 COMMD3Q9UBI1 195 aa9.54□□□□□ -0.88
MSH5-216ENST00000484309 WI2-2373I1.2A0A1W2PRP0 233 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 I3L521 148 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 K7EIL1 84 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 TNFSF12O43508 249 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 RRASP10301 218 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 TPPP2P59282 170 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 FXYD4P59646 89 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 TNXAQ16473 311 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 VMA21Q3ZAQ7 101 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 ASPHD1Q5U4P2 390 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 TCTEX1D1Q8N7M0 179 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 OR5T1Q8NG75 326 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 OR5M8Q8NGP6 311 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 OR1N2Q8NGR9 330 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 TCTEX1D2Q8WW35 142 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 DPF1Q92782 380 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 MCRIP2Q9BUT9 160 aaKnown RBP9.53□□□□□ -0.88
MSH5-216ENST00000484309 CCL28Q9NRJ3 127 aa9.53□□□□□ -0.88
MSH5-216ENST00000484309 TMEM127O75204 238 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 PPYP01298 95 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 TRGV3P03979 118 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 SAA1P0DJI8 122 aaPredicted RBP9.52□□□□□ -0.89
MSH5-216ENST00000484309 CBX5P45973 191 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 SLURP1P55000 103 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 ZNF616Q08AN1 781 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 FHL3Q13643 280 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 MRGPRG-AS1Q2M3A8 158 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 AKIRIN2Q53H80 203 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 VKORC1L1Q8N0U8 176 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 ACOT12Q8WYK0 555 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 PHB2Q99623 299 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 GPR61Q9BZJ8 451 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 PRELID3BQ9Y3B1 194 aa9.52□□□□□ -0.89
MSH5-216ENST00000484309 IGHV4OR15-8A0A075B7B6 117 aa9.51□□□□□ -0.89
MSH5-216ENST00000484309 A0A087WW49 117 aa9.51□□□□□ -0.89
MSH5-216ENST00000484309 SEC14L6B5MCN3 397 aa9.51□□□□□ -0.89
MSH5-216ENST00000484309 HPGDSO60760 199 aa9.51□□□□□ -0.89
MSH5-216ENST00000484309 SLC22A5O76082 557 aa9.51□□□□□ -0.89
MSH5-216ENST00000484309 LGALS1P09382 135 aaKnown RBP9.51□□□□□ -0.89
MSH5-216ENST00000484309 UBE2KP61086 200 aa9.51□□□□□ -0.89
MSH5-216ENST00000484309 EGFEM1PQ0D2K5 195 aa9.51□□□□□ -0.89
MSH5-216ENST00000484309 EIF4EBP1Q13541 118 aaPredicted RBP9.51□□□□□ -0.89
MSH5-216ENST00000484309 CDK10Q15131 360 aa9.51□□□□□ -0.89
MSH5-216ENST00000484309 PRSS8Q16651 343 aa9.51□□□□□ -0.89
MSH5-216ENST00000484309 C10orf55Q5SWW7 151 aa9.51□□□□□ -0.89
MSH5-216ENST00000484309 GPR107Q5VW38 600 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms