RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 ZDHHC11Q9H8X9 412 aa16.54■□□□□ 0.24
RPUSD3-216ENST00000484134 COL8A2P25067 703 aa16.53■□□□□ 0.24
RPUSD3-216ENST00000484134 THBS3P49746 956 aa16.53■□□□□ 0.24
RPUSD3-216ENST00000484134 ZNF645Q8N7E2 425 aa16.53■□□□□ 0.24
RPUSD3-216ENST00000484134 KCNIP2Q9NS61 270 aa16.53■□□□□ 0.24
RPUSD3-216ENST00000484134 WIPI2Q9Y4P8 454 aa16.53■□□□□ 0.24
RPUSD3-216ENST00000484134 FRMD6-AS1P0C7T7 363 aa16.53■□□□□ 0.24
RPUSD3-216ENST00000484134 EDDM3BP56851 147 aa16.53■□□□□ 0.24
RPUSD3-216ENST00000484134 SELENOTP62341 195 aa16.53■□□□□ 0.24
RPUSD3-216ENST00000484134 PATZ1Q9HBE1 687 aaKnown RBP16.53■□□□□ 0.24
RPUSD3-216ENST00000484134 PAM16Q9Y3D7 125 aa16.53■□□□□ 0.24
RPUSD3-216ENST00000484134 DOCK10Q96BY6 2186 aa16.52■□□□□ 0.24
RPUSD3-216ENST00000484134 F2Z2F3 143 aa16.52■□□□□ 0.24
RPUSD3-216ENST00000484134 SERF1AO75920 110 aa16.52■□□□□ 0.24
RPUSD3-216ENST00000484134 CELA3AP09093 270 aa16.52■□□□□ 0.24
RPUSD3-216ENST00000484134 BRS3P32247 399 aa16.52■□□□□ 0.24
RPUSD3-216ENST00000484134 CEBPDP49716 269 aaPredicted RBP16.52■□□□□ 0.24
RPUSD3-216ENST00000484134 OR52L2PQ8NGH6 319 aa16.52■□□□□ 0.24
RPUSD3-216ENST00000484134 OCC1Q8TAD7 63 aa16.52■□□□□ 0.24
RPUSD3-216ENST00000484134 HSPB9Q9BQS6 159 aa16.52■□□□□ 0.24
RPUSD3-216ENST00000484134 C15orf62A8K5M9 175 aa16.52■□□□□ 0.23
RPUSD3-216ENST00000484134 SCCPDHQ8NBX0 429 aa16.52■□□□□ 0.23
RPUSD3-216ENST00000484134 MRPS18CQ9Y3D5 142 aaKnown RBP16.52■□□□□ 0.23
RPUSD3-216ENST00000484134 NBEAQ8NFP9 2946 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 C17orf112F2Z3M2 114 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 F6UZH7 168 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 ERVK11-1P61568 191 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 BTF3L4Q96K17 158 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 LPAR2Q9HBW0 351 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 MDFIC2A0A1B0GVS7 189 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 MT-CO3P00414 261 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 SERPINA7P05543 415 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 KITLGP21583 273 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 TIMP3P35625 211 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 TNFSF10P50591 281 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 GAGE1Q13065 139 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 HLA-DRB5Q30154 266 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 WDR83OSQ9Y284 106 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 RNF114Q9Y508 228 aa16.51■□□□□ 0.23
RPUSD3-216ENST00000484134 SCO2A0A1W2PP80 73 aa16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 RBMXL2O75526 392 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 FOLR3P41439 243 aa16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 COMPP49747 757 aaPredicted RBP16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 TPPP2P59282 170 aa16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 HOXA4Q00056 320 aaPredicted RBP16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 ARSJQ5FYB0 599 aaPredicted RBP16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 MCEMP1Q8IX19 187 aa16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 VN1R17PQ8TDU5 208 aa16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 RYDENQ9NUL5 291 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 SLC17A3O00476 420 aa16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 RRHO14718 337 aa16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 PSPNO60542 156 aa16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 TMEM249Q2WGJ8 235 aa16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 IFI44Q8TCB0 444 aa16.5■□□□□ 0.23
RPUSD3-216ENST00000484134 C12orf77C9JDV5 145 aa16.49■□□□□ 0.23
RPUSD3-216ENST00000484134 ARL14EPLP0DKL9 152 aa16.49■□□□□ 0.23
RPUSD3-216ENST00000484134 OTX2P32243 289 aa16.49■□□□□ 0.23
RPUSD3-216ENST00000484134 ARR3P36575 388 aa16.49■□□□□ 0.23
RPUSD3-216ENST00000484134 PAFAH1B2P68402 229 aa16.49■□□□□ 0.23
RPUSD3-216ENST00000484134 BATFQ16520 125 aa16.49■□□□□ 0.23
RPUSD3-216ENST00000484134 SPINK14Q6IE38 97 aa16.49■□□□□ 0.23
RPUSD3-216ENST00000484134 PPP1R32Q7Z5V6 425 aa16.49■□□□□ 0.23
RPUSD3-216ENST00000484134 VASH2Q86V25 355 aa16.49■□□□□ 0.23
RPUSD3-216ENST00000484134 OR10G8Q8NGN5 311 aa16.49■□□□□ 0.23
RPUSD3-216ENST00000484134 CDIPTO14735 213 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 NEURL1O76050 574 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 CLDN14O95500 239 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 ESDP10768 282 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 CD1BP29016 333 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 PLP2Q04941 152 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 H2BFWTQ7Z2G1 175 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 MRPL52Q86TS9 123 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 RAB1CQ92928 201 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 CIB3Q96Q77 187 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 OR2J1Q9GZK6 312 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 MRPL18Q9H0U6 180 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 A0A1W2PPV4 95 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 LINC00473A8K010 186 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 K7EN84 100 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 RAB29O14966 203 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 CRISP2P16562 243 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 MRPS11P82912 194 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 PSG7Q13046 419 aa16.48■□□□□ 0.23
RPUSD3-216ENST00000484134 NXPH2O95156 264 aa16.47■□□□□ 0.23
RPUSD3-216ENST00000484134 CLDN18P56856 261 aa16.47■□□□□ 0.23
RPUSD3-216ENST00000484134 ZBTB34Q8NCN2 500 aa16.47■□□□□ 0.23
RPUSD3-216ENST00000484134 QTRT1Q9BXR0 403 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-216ENST00000484134 TFPI2P48307 235 aa16.47■□□□□ 0.23
RPUSD3-216ENST00000484134 ZNF90Q03938 601 aa16.47■□□□□ 0.23
RPUSD3-216ENST00000484134 ZNF146Q15072 292 aa16.47■□□□□ 0.23
RPUSD3-216ENST00000484134 KRTCAP3Q53RY4 240 aa16.47■□□□□ 0.23
RPUSD3-216ENST00000484134 GALMQ96C23 342 aa16.47■□□□□ 0.23
RPUSD3-216ENST00000484134 WISP2O76076 250 aa16.46■□□□□ 0.23
RPUSD3-216ENST00000484134 TFF1P04155 84 aa16.46■□□□□ 0.23
RPUSD3-216ENST00000484134 RAC2P15153 192 aa16.46■□□□□ 0.23
RPUSD3-216ENST00000484134 ALKBH6Q3KRA9 238 aa16.46■□□□□ 0.23
RPUSD3-216ENST00000484134 PCSK5Q92824 1860 aa16.46■□□□□ 0.23
RPUSD3-216ENST00000484134 MSL2Q9HCI7 577 aa16.46■□□□□ 0.23
RPUSD3-216ENST00000484134 YTHDF2Q9Y5A9 579 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-216ENST00000484134 SH2D1BO14796 132 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms