RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 CDK10Q15131 360 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 SNX29P2Q8IUI4 249 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 FOXRED2Q8IWF2 684 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 KLHDC1Q8N7A1 406 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 DYNC2LI1Q8TCX1 351 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 GPX8Q8TED1 209 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 GIMAP1Q8WWP7 306 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 CITED1Q99966 193 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 OR2D2Q9H210 308 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 PLSCR3Q9NRY6 295 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 SDHAF2Q9NX18 166 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 CCDC59Q9P031 241 aaKnown RBP7.06□□□□□ -1.28
COL8A1-207ENST00000483969 RABL2AQ9UBK7 228 aaPredicted RBP7.06□□□□□ -1.28
COL8A1-207ENST00000483969 EXTL2Q9UBQ6 330 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 RABL2BQ9UNT1 228 aa7.06□□□□□ -1.28
COL8A1-207ENST00000483969 DOCK11Q5JSL3 2073 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 MEIS3P1A6NDR6 274 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 SH2D7A6NKC9 451 aaPredicted RBP7.05□□□□□ -1.28
COL8A1-207ENST00000483969 H0YJW9 148 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 J3QRK9 145 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 ZNF701M0R085 212 aaPredicted RBP7.05□□□□□ -1.28
COL8A1-207ENST00000483969 CTDSP2O14595 271 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 KCNAB3O43448 404 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 TUSC2O75896 110 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 IGHG2P01859 326 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 FCER2P06734 321 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 FCGR2CP31995 323 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 LGALS7P47929 136 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 F2RL1P55085 397 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 RPS16P62249 146 aaKnown RBP7.05□□□□□ -1.28
COL8A1-207ENST00000483969 MMDQ15546 238 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 LIN54Q6MZP7 749 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 FAM131AQ6UXB0 335 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 GLDNQ6ZMI3 551 aaPredicted RBP7.05□□□□□ -1.28
COL8A1-207ENST00000483969 SLC35E3Q7Z769 313 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 PDPNQ86YL7 162 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 ZNF645Q8N7E2 425 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 Q8N9W7 124 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 ZNF383Q8NA42 475 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 DRAXINQ8NBI3 349 aaPredicted RBP7.05□□□□□ -1.28
COL8A1-207ENST00000483969 ZBTB34Q8NCN2 500 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 NPBQ8NG41 125 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 OR5H2Q8NGV7 314 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 OR6F1Q8NGZ6 308 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 BORCS5Q969J3 196 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 FLYWCH2Q96CP2 140 aaKnown RBP7.05□□□□□ -1.28
COL8A1-207ENST00000483969 TSNAXQ99598 290 aaKnown RBP7.05□□□□□ -1.28
COL8A1-207ENST00000483969 GON7Q9BXV9 100 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 SLC35D1Q9NTN3 355 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 NDUFA13Q9P0J0 144 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 RSL24D1Q9UHA3 163 aaKnown RBP7.05□□□□□ -1.28
COL8A1-207ENST00000483969 PFDN2Q9UHV9 154 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 DMRT1Q9Y5R6 373 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 ATRQ13535 2644 aa7.05□□□□□ -1.28
COL8A1-207ENST00000483969 M0QZ24 198 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 AP4M1O00189 453 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 NBR2O15453 112 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 RCVRNP35243 200 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 KRTAP10-3P60369 221 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 SLC35B1P78383 322 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 MRPS10P82664 201 aaKnown RBP7.04□□□□□ -1.28
COL8A1-207ENST00000483969 SRSF4Q08170 494 aaKnown RBP7.04□□□□□ -1.28
COL8A1-207ENST00000483969 DYRK1AQ13627 763 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 PLGLAQ15195 96 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 MSMO1Q15800 293 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 RTL8BQ17RB0 113 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 FOXB2Q5VYV0 432 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 DHRS11Q6UWP2 260 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 OVCH2Q7RTZ1 564 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 LYSMD2Q8IV50 215 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 OR5AU1Q8NGC0 362 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 MCFD2Q8NI22 146 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 CHPT1Q8WUD6 406 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 FCAMRQ8WWV6 532 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 SNAPC3Q92966 411 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 DIRAS2Q96HU8 199 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 RITA1Q96K30 269 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 MIXL1Q9H2W2 232 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 EHFQ9NZC4 300 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 ANAPC10Q9UM13 185 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 RBMX2Q9Y388 322 aaKnown RBP7.04□□□□□ -1.28
COL8A1-207ENST00000483969 PRELID3BQ9Y3B1 194 aa7.04□□□□□ -1.28
COL8A1-207ENST00000483969 RRHO14718 337 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 NDUFA3O95167 84 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 PPYP01298 95 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 PMP2P02689 132 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 OPN1MWP04001 364 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 IFNA6P05013 189 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 OPN1MW2P0DN77 364 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 OPN1MW3P0DN78 364 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 AADACP22760 399 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 HLA-DMAP28067 261 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 DUTP33316 252 aaKnown RBP7.03□□□□□ -1.28
COL8A1-207ENST00000483969 RFX2P48378 723 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 HERV-K104P61576 105 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 TSPAN5P62079 268 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 PSG5Q15238 335 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 C5orf64Q2M2E5 130 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 TM4SF20Q53R12 229 aa7.03□□□□□ -1.28
COL8A1-207ENST00000483969 ACTBL2Q562R1 376 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms