RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 WDR25Q64LD2 544 aaPredicted RBP21.51■■□□□ 1.03
SHOX2-204ENST00000483851 ATRAIDQ6UW56 229 aa21.51■■□□□ 1.03
SHOX2-204ENST00000483851 Q6ZRM9 215 aa21.51■■□□□ 1.03
SHOX2-204ENST00000483851 KIAA1324LA8MWY0 1029 aaPredicted RBP21.5■■□□□ 1.03
SHOX2-204ENST00000483851 WRBO00258 174 aa21.5■■□□□ 1.03
SHOX2-204ENST00000483851 LY6HO94772 140 aa21.5■■□□□ 1.03
SHOX2-204ENST00000483851 EPHA1P21709 976 aa21.5■■□□□ 1.03
SHOX2-204ENST00000483851 POLR2GP62487 172 aaKnown RBP eCLIP21.5■■□□□ 1.03
SHOX2-204ENST00000483851 BTN1A1Q13410 526 aa21.5■■□□□ 1.03
SHOX2-204ENST00000483851 FAM71F2Q6NXP2 309 aa21.5■■□□□ 1.03
SHOX2-204ENST00000483851 CLEC9AQ6UXN8 241 aa21.5■■□□□ 1.03
SHOX2-204ENST00000483851 GINS3Q9BRX5 216 aa21.5■■□□□ 1.03
SHOX2-204ENST00000483851 PATZ1Q9HBE1 687 aaKnown RBP21.5■■□□□ 1.03
SHOX2-204ENST00000483851 SMG1Q96Q15 3661 aaKnown RBP21.5■■□□□ 1.03
SHOX2-204ENST00000483851 FAM90A9PA6NNJ1 464 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 TOR1AO14656 332 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 CDKN1AP38936 164 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 GNG10P50151 68 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 OR2B11Q5JQS5 317 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 C10orf91Q5T1B1 145 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 BTNL8Q6UX41 500 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 RAB40CQ96S21 281 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 DOCK11Q5JSL3 2073 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 KRASP01116 189 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 IGHV1-8P0DP01 117 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 SRSF3P84103 164 aaKnown RBP21.49■■□□□ 1.03
SHOX2-204ENST00000483851 LYPD6BQ8NI32 183 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 PARP11Q9NR21 331 aa21.49■■□□□ 1.03
SHOX2-204ENST00000483851 HRNRQ86YZ3 2850 aaPredicted RBP21.48■■□□□ 1.03
SHOX2-204ENST00000483851 A0A1W2PPE3 182 aa21.48■■□□□ 1.03
SHOX2-204ENST00000483851 FCGR3BO75015 233 aa21.48■■□□□ 1.03
SHOX2-204ENST00000483851 VAMP2P63027 116 aa21.48■■□□□ 1.03
SHOX2-204ENST00000483851 C11orf42Q8N5U0 333 aa21.48■■□□□ 1.03
SHOX2-204ENST00000483851 OR2C3Q8N628 320 aa21.48■■□□□ 1.03
SHOX2-204ENST00000483851 OR4S2Q8NH73 311 aa21.48■■□□□ 1.03
SHOX2-204ENST00000483851 TNFRSF14Q92956 283 aa21.48■■□□□ 1.03
SHOX2-204ENST00000483851 FBXO24O75426 580 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 MED6O75586 246 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 SEC11BP0C7V7 166 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 G6PCP35575 357 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 GPR6P46095 362 aaPredicted RBP21.47■■□□□ 1.03
SHOX2-204ENST00000483851 BLOC1S1P78537 153 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 NHLH2Q02577 135 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 ZNF833PQ6ZTB9 187 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 H2BFWTQ7Z2G1 175 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 LY6G5BQ8NDX9 201 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 OR9G1Q8NH87 305 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 SLC25A31Q9H0C2 315 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.47■■□□□ 1.03
SHOX2-204ENST00000483851 LYRM2Q9NU23 88 aaPredicted RBP21.47■■□□□ 1.03
SHOX2-204ENST00000483851 hCG_1809904A0A1W2PP81 198 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 A0A1W2PPE2 198 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 A0A1W2PR64 198 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 A0A1W2PRV1 198 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 ADCYAP1P18509 176 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 EWSR1Q01844 656 aaKnown RBP eCLIP21.47■■□□□ 1.03
SHOX2-204ENST00000483851 TAGLNQ01995 201 aaKnown RBP21.47■■□□□ 1.03
SHOX2-204ENST00000483851 SREK1IP1Q8N9Q2 155 aaPredicted RBP21.47■■□□□ 1.03
SHOX2-204ENST00000483851 IGFBPL1Q8WX77 278 aa21.47■■□□□ 1.03
SHOX2-204ENST00000483851 BORCS7-ASMTA0A0B4J1R7 106 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 LOC105371267A0A1B0GV96 52 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 MARCH11A6NNE9 402 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 J3QR06 171 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 SSSCA1O60232 199 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 SPP1P10451 314 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 CAV2P51636 162 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 MIDNQ504T8 468 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 C1orf229Q6ZS94 237 aaPredicted RBP21.46■■□□□ 1.03
SHOX2-204ENST00000483851 TMEM186Q96B77 213 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 R3HDM4Q96D70 268 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 CACFD1Q9UGQ2 172 aa21.46■■□□□ 1.03
SHOX2-204ENST00000483851 PPIAL4CA0A0B4J2A2 164 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 CHST1O43916 411 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 RNF224P0DH78 156 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 PPIAL4GP0DN37 164 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 ZNF137PP52743 207 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 LINC00205P59089 165 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 NARS2Q96I59 477 aaKnown RBP21.45■■□□□ 1.02
SHOX2-204ENST00000483851 TMEM133Q9H2Q1 129 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 WSB1Q9Y6I7 421 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 SYNGR2O43760 224 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 NQO2P16083 231 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 TAS2R30P59541 319 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 IZUMO4Q1ZYL8 232 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 DHRS7BQ6IAN0 325 aaPredicted RBP21.45■■□□□ 1.02
SHOX2-204ENST00000483851 MAGT1Q9H0U3 335 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 HRH4Q9H3N8 390 aa21.45■■□□□ 1.02
SHOX2-204ENST00000483851 IGSF23A1L1A6 192 aa21.44■■□□□ 1.02
SHOX2-204ENST00000483851 LIPFP07098 398 aa21.44■■□□□ 1.02
SHOX2-204ENST00000483851 ERVFRD-1P60508 538 aa21.44■■□□□ 1.02
SHOX2-204ENST00000483851 GNB2P62879 340 aa21.44■■□□□ 1.02
SHOX2-204ENST00000483851 AKR1C1Q04828 323 aa21.44■■□□□ 1.02
SHOX2-204ENST00000483851 HSPB7Q9UBY9 170 aa21.44■■□□□ 1.02
SHOX2-204ENST00000483851 CARHSP1Q9Y2V2 147 aaKnown RBP21.44■■□□□ 1.02
SHOX2-204ENST00000483851 ZFYVE26Q68DK2 2539 aa21.44■■□□□ 1.02
SHOX2-204ENST00000483851 FAM24AA6NFZ4 105 aa21.43■■□□□ 1.02
SHOX2-204ENST00000483851 ERVK-16P61578 105 aa21.43■■□□□ 1.02
SHOX2-204ENST00000483851 RPL23AP62750 156 aaKnown RBP21.43■■□□□ 1.02
SHOX2-204ENST00000483851 BAXQ07812 192 aa21.43■■□□□ 1.02
SHOX2-204ENST00000483851 ZNF383Q8NA42 475 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms