RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 GNPNAT1Q96EK6 184 aaPredicted RBP10.87□□□□□ -0.67
CPNE1-225ENST00000483495 HRH4Q9H3N8 390 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 NQO2P16083 231 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 ARL16Q0P5N6 197 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 C4orf17Q53FE4 359 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 PDLIM3Q53GG5 364 aaPredicted RBP10.87□□□□□ -0.67
CPNE1-225ENST00000483495 HAPLN4Q86UW8 402 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 LYG1Q8N1E2 194 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 KALRNO60229 2985 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 ITPR1Q14643 2758 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 MED19A0JLT2 244 aaPredicted RBP10.86□□□□□ -0.67
CPNE1-225ENST00000483495 UMAD1C9J7I0 102 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 OR9G9P0C7N8 305 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 METTL15P1P0C7V9 234 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 CCL3L1P16619 93 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 AGAP20933 346 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 COL8A2P25067 703 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 GNG10P50151 68 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 DLX6P56179 175 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 HBG1P69891 147 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 HBG2P69892 147 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 SPANXN5Q5MJ07 72 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 ZNF525Q8N782 197 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 C8orf31Q8N9H6 132 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 ZNF383Q8NA42 475 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 ZNF596Q8TC21 504 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 CIB3Q96Q77 187 aaPredicted RBP10.86□□□□□ -0.67
CPNE1-225ENST00000483495 PARD6GQ9BYG4 376 aaPredicted RBP10.86□□□□□ -0.67
CPNE1-225ENST00000483495 SMG1Q96Q15 3661 aaKnown RBP10.86□□□□□ -0.67
CPNE1-225ENST00000483495 PKDREJQ9NTG1 2253 aa10.86□□□□□ -0.67
CPNE1-225ENST00000483495 PPIHO43447 177 aaKnown RBP10.85□□□□□ -0.67
CPNE1-225ENST00000483495 LY86O95711 162 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 ERVK-16P61578 105 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 TMEM155Q4W5P6 130 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 C11orf71Q6IPW1 123 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 OR2G3Q8NGZ4 309 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 OR52E5Q8NH55 327 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 DTD1Q8TEA8 209 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 CBLN4Q9NTU7 201 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 TRBV23-1A0A0A0MS06 115 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 TMEM218A2RU14 115 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 IFNA5P01569 189 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 IGHV2-70P01814 119 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 OR8U8P0C7N1 319 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 CAMLGP49069 296 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 POU2AF1Q16633 256 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 TMEM182Q6ZP80 229 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-225ENST00000483495 ZNF833PQ6ZTB9 187 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 LINC00311Q8N616 119 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 COMMD1Q8N668 190 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 H1FXQ92522 213 aaKnown RBP10.85□□□□□ -0.67
CPNE1-225ENST00000483495 RAB39BQ96DA2 213 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 OR4C12Q96R67 309 aa10.85□□□□□ -0.67
CPNE1-225ENST00000483495 QTRT1Q9BXR0 403 aaKnown RBP10.85□□□□□ -0.67
CPNE1-225ENST00000483495 A0A087X0M5 115 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 A0A1B0GX30 115 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 PMS2P5A8MQ11 134 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 CT45A6P0DMU7 189 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 CT45A5P0DMU8 189 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 CT45A7P0DMV0 189 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 FHITP49789 147 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 ERVFRD-1P60508 538 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 SRSF3P84103 164 aaKnown RBP10.84□□□□□ -0.67
CPNE1-225ENST00000483495 RELBQ01201 579 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 ZNF429Q86V71 674 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 ITLN2Q8WWU7 325 aaPredicted RBP10.84□□□□□ -0.67
CPNE1-225ENST00000483495 TMEM140Q9NV12 185 aa10.84□□□□□ -0.67
CPNE1-225ENST00000483495 LYNX1G3V0Z9 82 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 RBMXL2O75526 392 aaKnown RBP10.83□□□□□ -0.68
CPNE1-225ENST00000483495 C1QL1O75973 258 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 PRH1P02810 166 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 LYNX1P0DP58 116 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 SPCS3P61009 180 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 FAM71F2Q6NXP2 309 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 ZNF841Q6ZN19 808 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 ZDHHC16Q969W1 377 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 RAB1BQ9H0U4 201 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 HIPK2Q9H2X6 1198 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 RFNGQ9Y644 331 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 HCFC1P51610 2035 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 GPR37O15354 613 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 SCO1O75880 301 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 CD5P06127 495 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 UQCRFS1P47985 274 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 RUNX1Q01196 453 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 SLC38A11Q08AI6 406 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 ATP6V1FQ16864 119 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 LRRC75BQ2VPJ9 315 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 C10orf91Q5T1B1 145 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 DHRS7BQ6IAN0 325 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-225ENST00000483495 SSX9Q7RTT3 188 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 DTX2Q86UW9 622 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 VKORC1L1Q8N0U8 176 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 C11orf42Q8N5U0 333 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 OR4A16Q8NH70 328 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 RHOVQ96L33 236 aa10.83□□□□□ -0.68
CPNE1-225ENST00000483495 PSMG3Q9BT73 122 aaPredicted RBP10.83□□□□□ -0.68
CPNE1-225ENST00000483495 RALYQ9UKM9 306 aaKnown RBP10.83□□□□□ -0.68
CPNE1-225ENST00000483495 TMA7Q9Y2S6 64 aaKnown RBP10.83□□□□□ -0.68
CPNE1-225ENST00000483495 RELNP78509 3460 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms