RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 IGLV2-23P01705 113 aa10.35□□□□□ -0.75
CTDSP1-208ENST00000482272 CRYGBP07316 175 aa10.35□□□□□ -0.75
CTDSP1-208ENST00000482272 ZP3P21754 424 aa10.35□□□□□ -0.75
CTDSP1-208ENST00000482272 TMEM177Q53S58 311 aa10.35□□□□□ -0.75
CTDSP1-208ENST00000482272 ADTRPQ96IZ2 230 aa10.35□□□□□ -0.75
CTDSP1-208ENST00000482272 ATG5Q9H1Y0 275 aa10.35□□□□□ -0.75
CTDSP1-208ENST00000482272 IGKV1D-8A0A087WSZ0 117 aa10.34□□□□□ -0.75
CTDSP1-208ENST00000482272 PJVKQ0ZLH3 352 aa10.34□□□□□ -0.75
CTDSP1-208ENST00000482272 VMA21Q3ZAQ7 101 aa10.34□□□□□ -0.75
CTDSP1-208ENST00000482272 C22orf42Q6IC83 251 aa10.34□□□□□ -0.75
CTDSP1-208ENST00000482272 Q6ZS49 121 aa10.34□□□□□ -0.75
CTDSP1-208ENST00000482272 ANKRD13BQ86YJ7 626 aa10.34□□□□□ -0.75
CTDSP1-208ENST00000482272 TEX45Q8NA69 505 aa10.34□□□□□ -0.75
CTDSP1-208ENST00000482272 PHB2Q99623 299 aa10.34□□□□□ -0.75
CTDSP1-208ENST00000482272 HUWE1Q7Z6Z7 4374 aaKnown RBP10.34□□□□□ -0.75
CTDSP1-208ENST00000482272 BRI3O95415 125 aa10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 CTXN2P0C2S0 81 aa10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 AADACP22760 399 aa10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 GABARAPL2P60520 117 aa10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 TATDN3Q17R31 274 aa10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 MRGPRG-AS1Q2M3A8 158 aa10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 CDNFQ49AH0 187 aa10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 H1FOOQ8IZA3 346 aaPredicted RBP10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 USMG5Q96IX5 58 aa10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 ST6GALNAC5Q9BVH7 336 aa10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 STUB1Q9UNE7 303 aa10.33□□□□□ -0.76
CTDSP1-208ENST00000482272 ANKRD34BA5PLL1 514 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 MSGN1A6NI15 193 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 SRRM4A7MD48 611 aaKnown RBP10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 C3orf84H3BNL1 204 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 DTYMKP23919 212 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 FGF9P31371 208 aaPredicted RBP10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 DUTP33316 252 aaKnown RBP10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 UBE2KP61086 200 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 OVCH2Q7RTZ1 564 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 TPRA1Q86W33 373 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 SBSPONQ8IVN8 264 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 OSR1Q8TAX0 266 aaPredicted RBP10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 DDB2Q92466 427 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 RSRP1Q9BUV0 290 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 TINAGL1Q9GZM7 467 aaPredicted RBP10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 DCSTAMPQ9H295 470 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 ZMAT4Q9H898 229 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 COA4Q9NYJ1 87 aa10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 PEF1Q9UBV8 284 aaKnown RBP10.32□□□□□ -0.76
CTDSP1-208ENST00000482272 RYR3Q15413 4870 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 NOTOA8MTQ0 251 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 J3QRK9 145 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 SCGNO76038 276 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 SLC22A5O76082 557 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 CRYZL1O95825 349 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 IGLV1-51P01701 117 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 FRMD6-AS1P0C7T7 363 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 DEFA5Q01523 94 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 KLF5Q13887 457 aaPredicted RBP10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 TNXAQ16473 311 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 UBE2UQ5VVX9 321 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 HACD4Q5VWC8 232 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 DCUN1D5Q9BTE7 237 aa10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 TXNL4BQ9NX01 149 aaKnown RBP10.31□□□□□ -0.76
CTDSP1-208ENST00000482272 TRIM64CA6NLI5 447 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 LINC00473A8K010 186 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 MPPED1O15442 326 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 CREBL2O60519 120 aaPredicted RBP10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 ACTL6BO94805 426 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 ATP6V1G2O95670 118 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 OR9G9P0C7N8 305 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 PSMB9P28065 219 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 PRSS8Q16651 343 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 ZNF343Q6P1L6 599 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 CNIH2Q6PI25 160 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 SPARTQ8N0X7 666 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 ZNF645Q8N7E2 425 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 ACOT12Q8WYK0 555 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 FCGR1BQ92637 280 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 RCHY1Q96PM5 261 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 YTHDF1Q9BYJ9 559 aaKnown RBP10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 Q9H521 79 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 SSR3Q9UNL2 185 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 PRELID3BQ9Y3B1 194 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 OR2W1Q9Y3N9 320 aa10.3□□□□□ -0.76
CTDSP1-208ENST00000482272 H0Y980 276 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 FCGR3BO75015 233 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 RBMXL2O75526 392 aaKnown RBP10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 HLA-DQB1P01920 261 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 APELAP0DMC3 54 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 CD36P16671 472 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 GNG2P59768 71 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 RPEL1Q2QD12 228 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 HAPLN4Q86UW8 402 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 SGPP2Q8IWX5 399 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 OR9G4Q8NGQ1 327 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 SRSF12Q8WXF0 261 aaKnown RBP10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 SNAPC3Q92966 411 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 RNF167Q9H6Y7 350 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 DAPK2Q9UIK4 370 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 MRPS7Q9Y2R9 242 aaKnown RBP10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 RRP15Q9Y3B9 282 aaKnown RBP10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 SORL1Q92673 2214 aa10.29□□□□□ -0.76
CTDSP1-208ENST00000482272 TUSC2O75896 110 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms