RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 OR5P3Q8WZ94 311 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 SPTSSAQ969W0 71 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 MAGOHBQ96A72 148 aaKnown RBP1.3□□□□□ -2.2
USH2A-204ENST00000481786 SPACA5Q96QH8 159 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 MBOAT4Q96T53 435 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 MRPL57Q9BQC6 102 aaKnown RBP1.3□□□□□ -2.2
USH2A-204ENST00000481786 SLC35A5Q9BS91 424 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 CHRDL1Q9BU40 450 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 SCRT1Q9BWW7 348 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 CST11Q9H112 138 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 ZNF286AQ9HBT8 521 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 MID1IP1Q9NPA3 183 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 ZNF331Q9NQX6 463 aaPredicted RBP1.3□□□□□ -2.2
USH2A-204ENST00000481786 PARP11Q9NR21 331 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 TAS2R3Q9NYW6 316 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 CNOT2Q9NZN8 540 aaKnown RBP1.3□□□□□ -2.2
USH2A-204ENST00000481786 NDUFA13Q9P0J0 144 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 PEF1Q9UBV8 284 aaKnown RBP1.3□□□□□ -2.2
USH2A-204ENST00000481786 SLC22A13Q9Y226 551 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 ANGPT4Q9Y264 503 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 POLR1DQ9Y2S0 133 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 MPC1Q9Y5U8 109 aa1.3□□□□□ -2.2
USH2A-204ENST00000481786 A0A087WTM6 91 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 TRGV10A0A0A0MS01 117 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 IGHV7-81A0A0B4J1V7 117 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 IGHV1-3A0A0C4DH29 117 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 A0A1B0GW64 132 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 PRSS37A4D1T9 235 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 FBLL1A6NHQ2 334 aaKnown RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 C2orf70A6NJV1 201 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 E7ESA3 106 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 E9PLD3 99 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 LOC110117498-PIK3R3F6TDL0 507 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 H3BUA1 57 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 M0R135 149 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 CXCR6O00574 342 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 DNALI1O14645 258 aaPredicted RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 HSD17B6O14756 317 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 RIPK2O43353 540 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 XRCC2O43543 280 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 CHP2O43745 196 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 NOS1APO75052 506 aaPredicted RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 CA1P00915 261 aaPredicted RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 CST4P01036 141 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 TRGV3P03979 118 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 TSPAN19P0C672 248 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 CLUP10909 449 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 FUT1P19526 365 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 ERP29P30040 261 aaKnown RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 BLVRBP30043 206 aaPredicted RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 IFNA8P32881 189 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 AQP2P41181 271 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 SERPINB8P50452 374 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 SSTP61278 116 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 NAA20P61599 178 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 GNG3P63215 75 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 FAM3AP98173 230 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 LRRC74AQ0VAA2 488 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 EDDM3AQ14507 147 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 PPP1R7Q15435 360 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 OR1Q1Q15612 314 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 ACTBL2Q562R1 376 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 TMEM41BQ5BJD5 291 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 PRAMEF5Q5TYX0 476 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 ANXA8L1Q5VT79 327 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 TTC33Q6PID6 262 aaPredicted RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 DRAM2Q6UX65 266 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 Q6ZRN7 208 aaPredicted RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 Q6ZRU5 148 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 Q6ZSA8 131 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 TRAPPC6BQ86SZ2 158 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 SLC22A9Q8IVM8 553 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 KRTCAP2Q8N6L1 136 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 TRIML2Q8N7C3 387 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 OR8J2Q8NGG1 315 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 OR4D6Q8NGJ1 314 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 OR10X1Q8NGY0 326 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 OR2AE1Q8NHA4 323 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 AQP3Q92482 292 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 THRSPQ92748 146 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 IL22RA2Q969J5 263 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 L3HYPDHQ96EM0 354 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 USMG5Q96IX5 58 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 RNF170Q96K19 258 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 SLC35E1Q96K37 410 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 PKNOX2Q96KN3 472 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 PPP3R2Q96LZ3 170 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 RDH12Q96NR8 316 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 ZNF426Q9BUY5 554 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 SLC25A39Q9BZJ4 359 aaPredicted RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 OR51I2Q9H344 312 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 TMEM38AQ9H6F2 299 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 HES4Q9HCC6 221 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 BCL2L10Q9HD36 194 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 THUMPD1Q9NXG2 353 aaKnown RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 RAB26Q9ULW5 256 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 SLC7A11Q9UPY5 501 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 POLDIP2Q9Y2S7 368 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 EXOSC1Q9Y3B2 195 aaKnown RBP1.29□□□□□ -2.2
USH2A-204ENST00000481786 RHBDD3Q9Y3P4 386 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms