RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 CENPEQ02224 2701 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 hCG_2014768A0A024R1R8 64 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 A0A1B0GU03 582 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 A0A1W2PPI3 338 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 VGLL3A8MV65 326 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 CD5LO43866 347 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 LY86O95711 162 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 LPAR6P43657 344 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 RAP2BP61225 183 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 FGL1Q08830 312 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 KLRD1Q13241 179 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 SCGB2A2Q13296 93 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 SP6Q3SY56 376 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 C1orf229Q6ZS94 237 aaPredicted RBP8.22□□□□□ -1.09
USP39-215ENST00000481409 SLC35G3Q8N808 338 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 UXS1Q8NBZ7 420 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 OR4A5Q8NH83 315 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 C2orf50Q96LR7 162 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 MRPL20Q9BYC9 149 aaKnown RBP8.22□□□□□ -1.09
USP39-215ENST00000481409 NMES1Q9C002 83 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 ZNF436Q9C0F3 470 aaPredicted RBP8.22□□□□□ -1.09
USP39-215ENST00000481409 MEGF9Q9H1U4 602 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 MGAT4CQ9UBM8 478 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 MMP24Q9Y5R2 645 aa8.22□□□□□ -1.09
USP39-215ENST00000481409 TRAV40A0A0B4J280 105 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 MARCH11A6NNE9 402 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 GOSR2O14653 212 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 PFDN1O60925 122 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 CCNKO75909 580 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 SPDEFO95238 335 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 FSHBP01225 129 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 FBP1P09467 338 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 PET100P0DJ07 73 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 SAA4P35542 130 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 AKR1C2P52895 323 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 BRWD1-AS2P59051 145 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 EBI3Q14213 229 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 FCN2Q15485 313 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 NMSQ5H8A3 153 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 GGNBP1Q5YKI7 109 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 THOC7Q6I9Y2 204 aaKnown RBP8.21□□□□□ -1.1
USP39-215ENST00000481409 H2BFWTQ7Z2G1 175 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 MOB3BQ86TA1 216 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 TCTE3Q8IZS6 198 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 DRAXINQ8NBI3 349 aaPredicted RBP8.21□□□□□ -1.1
USP39-215ENST00000481409 OR11H7Q8NGC8 314 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 OR8H1Q8NGG4 311 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 SEC22AQ96IW7 307 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 TSNAXQ99598 290 aaKnown RBP8.21□□□□□ -1.1
USP39-215ENST00000481409 PDCD10Q9BUL8 212 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 NUP50Q9UKX7 468 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 PDZD2O15018 2839 aa8.21□□□□□ -1.1
USP39-215ENST00000481409 ABCA2Q9BZC7 2435 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 C5orf51A6NDU8 294 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 FAM90A26D6RGX4 464 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 H7C2Y5 167 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 RAMP3O60896 148 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 S1PR2O95136 353 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 CRYZL1O95825 349 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 FAM106CPP0CH98 169 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 HNF1AP20823 631 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 SMCO1Q147U7 214 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 VMA21Q3ZAQ7 101 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 LYZL2Q7Z4W2 148 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 TEX45Q8NA69 505 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 DMBX1Q8NFW5 382 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 OR2T10Q8NGZ9 312 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 RNASE11Q8TAA1 199 aaKnown RBP8.2□□□□□ -1.1
USP39-215ENST00000481409 LHFPL5Q8TAF8 219 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 CFHR4Q92496 578 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 R3HDM4Q96D70 268 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 MS4A7Q9GZW8 240 aaPredicted RBP8.2□□□□□ -1.1
USP39-215ENST00000481409 FKBP11Q9NYL4 201 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 BET1LQ9NYM9 111 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 ZNRD1Q9P1U0 126 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 FAM96BQ9Y3D0 163 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 HILPDAQ9Y5L2 63 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 WNK2Q9Y3S1 2297 aa8.2□□□□□ -1.1
USP39-215ENST00000481409 TIMM23O14925 209 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 SHOXO15266 292 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 VENTXO95231 258 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 MOSP00540 346 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 IGKV1-39P01597 117 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 IGKV1D-39P04432 117 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 IL6RP08887 468 aaPredicted RBP8.19□□□□□ -1.1
USP39-215ENST00000481409 HOXB5P09067 269 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 P0C879 139 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 REG1BP48304 166 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 DLX1P56177 255 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 UBE2KP61086 200 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 RPS16P62249 146 aaKnown RBP8.19□□□□□ -1.1
USP39-215ENST00000481409 SSX2Q16385 188 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 IAH1Q2TAA2 248 aaPredicted RBP8.19□□□□□ -1.1
USP39-215ENST00000481409 AARDQ4LEZ3 155 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 LHFPL4Q7Z7J7 247 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 ZNF429Q86V71 674 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 FOXRED2Q8IWF2 684 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 MAPK1IP1LQ8NDC0 245 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 OR52E5Q8NH55 327 aa8.19□□□□□ -1.1
USP39-215ENST00000481409 ZDHHC16Q969W1 377 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms