RNA–Protein interactions for RNA: ENST00000480994.5

NECAB3-208, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 732 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-208	ENST00000480994	VSIG4	Q9Y279	399 aa		13.15	□□□□□ -0.3
NECAB3-208	ENST00000480994	COL7A1	Q02388	2944 aa		13.15	□□□□□ -0.3
NECAB3-208	ENST00000480994	IGKV1D-13	A0A0B4J2D9	117 aa		13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994		A0A1W2PN81	502 aa		13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994	IGKV1-13	P0DP09	117 aa		13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994	NFYA	P23511	347 aa	Predicted RBP	13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994	CHRNA7	P36544	502 aa		13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994	CBX5	P45973	191 aa		13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994	BVES	Q8NE79	360 aa		13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994	OSR1	Q8TAX0	266 aa	Predicted RBP	13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994	FUNDC2	Q9BWH2	189 aa		13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994	RBMX2	Q9Y388	322 aa	Known RBP	13.14	□□□□□ -0.31
NECAB3-208	ENST00000480994	ARPC1B	O15143	372 aa	Known RBP	13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	SHOX	O15266	292 aa		13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	PRB2	P02812	416 aa	Predicted RBP	13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	SMIM18	P0DKX4	95 aa		13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	UBE2K	P61086	200 aa		13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	LSM3	P62310	102 aa	Known RBP	13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	ACTBL2	Q562R1	376 aa		13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	DPF1	Q92782	380 aa		13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	S100A16	Q96FQ6	103 aa	Known RBP	13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	DUX3	Q96PT4	197 aa		13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	SLA2	Q9H6Q3	261 aa		13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	GNB4	Q9HAV0	340 aa		13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	ANAPC10	Q9UM13	185 aa		13.13	□□□□□ -0.31
NECAB3-208	ENST00000480994	SRRM4	A7MD48	611 aa	Known RBP	13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994		H3BUA1	57 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	BRI3	O95415	125 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	ARPC4	P59998	168 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	FXYD3	Q14802	87 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	MRGPRG-AS1	Q2M3A8	158 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	UNQ5815/PRO19632	Q6UWF5	114 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	KCTD9	Q7L273	389 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	GVQW1	Q8N7I0	195 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	SAMD12	Q8N8I0	201 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	TEX45	Q8NA69	505 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	LFNG	Q8NES3	379 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	ABHD5	Q8WTS1	349 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	SNAPC3	Q92966	411 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	TMEM68	Q96MH6	324 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	CMTM3	Q96MX0	182 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	CLCC1	Q96S66	551 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	HSD17B10	Q99714	261 aa	Known RBP	13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	FAM103A1	Q9BTL3	118 aa	Known RBP	13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	SORL1	Q92673	2214 aa		13.12	□□□□□ -0.31
NECAB3-208	ENST00000480994	CRYZL1	O95825	349 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	OR8U8	P0C7N1	319 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	KRTAP10-11	P60412	298 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	NCS1	P62166	190 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	ZNF616	Q08AN1	781 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	VMA21	Q3ZAQ7	101 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	ASPHD1	Q5U4P2	390 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	OR11H1	Q8NG94	326 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	MRAP	Q8TCY5	172 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	ZMAT5	Q9UDW3	170 aa	Known RBP	13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	MRPS7	Q9Y2R9	242 aa	Known RBP	13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	PRELID3B	Q9Y3B1	194 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	A3GALT2	U3KPV4	340 aa		13.11	□□□□□ -0.31
NECAB3-208	ENST00000480994	GABARAP	O95166	117 aa		13.1	□□□□□ -0.31
NECAB3-208	ENST00000480994	PPY	P01298	95 aa		13.1	□□□□□ -0.31
NECAB3-208	ENST00000480994	LGALS1	P09382	135 aa	Known RBP	13.1	□□□□□ -0.31
NECAB3-208	ENST00000480994	TAS2R20	P59543	309 aa		13.1	□□□□□ -0.31
NECAB3-208	ENST00000480994	GNB1	P62873	340 aa		13.1	□□□□□ -0.31
NECAB3-208	ENST00000480994	PJVK	Q0ZLH3	352 aa		13.1	□□□□□ -0.31
NECAB3-208	ENST00000480994	TMEM69	Q5SWH9	247 aa		13.1	□□□□□ -0.31
NECAB3-208	ENST00000480994	ZNF66	Q6ZN08	573 aa		13.1	□□□□□ -0.31
NECAB3-208	ENST00000480994	OR5AP2	Q8NGF4	316 aa		13.1	□□□□□ -0.31
NECAB3-208	ENST00000480994	GRPEL2	Q8TAA5	225 aa		13.1	□□□□□ -0.31
NECAB3-208	ENST00000480994	CREBL2	O60519	120 aa	Predicted RBP	13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	APOA1	P02647	267 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	PTHLH	P12272	177 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	NAT1	P18440	290 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	CD40LG	P29965	261 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	FCGR2C	P31995	323 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	VBP1	P61758	197 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	RPL30	P62888	115 aa	Known RBP	13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	CDK10	Q15131	360 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	PRSS8	Q16651	343 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	C9orf66	Q5T8R8	295 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	ANKRD13B	Q86YJ7	626 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	POC5	Q8NA72	575 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	ZBTB34	Q8NCN2	500 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	OR1N2	Q8NGR9	330 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	OR4S2	Q8NH73	311 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994	ACOT12	Q8WYK0	555 aa		13.09	□□□□□ -0.31
NECAB3-208	ENST00000480994		K7EIL1	84 aa		13.08	□□□□□ -0.32
NECAB3-208	ENST00000480994	FCGR3B	O75015	233 aa		13.08	□□□□□ -0.32
NECAB3-208	ENST00000480994	CNIH1	O95406	144 aa		13.08	□□□□□ -0.32
NECAB3-208	ENST00000480994	SAA1	P0DJI8	122 aa	Predicted RBP	13.08	□□□□□ -0.32
NECAB3-208	ENST00000480994	AADAC	P22760	399 aa		13.08	□□□□□ -0.32
NECAB3-208	ENST00000480994	HOXD3	P31249	432 aa	Predicted RBP	13.08	□□□□□ -0.32
NECAB3-208	ENST00000480994	RAB25	P57735	213 aa		13.08	□□□□□ -0.32
NECAB3-208	ENST00000480994	CTF1	Q16619	201 aa		13.08	□□□□□ -0.32
NECAB3-208	ENST00000480994	GIMAP1	Q8WWP7	306 aa		13.08	□□□□□ -0.32
NECAB3-208	ENST00000480994	IFT46	Q9NQC8	304 aa		13.08	□□□□□ -0.32
NECAB3-208	ENST00000480994		J3QRK9	145 aa		13.07	□□□□□ -0.32
NECAB3-208	ENST00000480994	EIF4E	P06730	217 aa	Known RBP	13.07	□□□□□ -0.32
NECAB3-208	ENST00000480994	KIR2DS2	P43631	304 aa		13.07	□□□□□ -0.32
NECAB3-208	ENST00000480994	BRWD1-AS2	P59051	145 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms