RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 LINC00473A8K010 186 aa13.22□□□□□ -0.29
HSPG2-209ENST00000480900 SHOXO15266 292 aa13.22□□□□□ -0.29
HSPG2-209ENST00000480900 CRYGBP07316 175 aa13.22□□□□□ -0.29
HSPG2-209ENST00000480900 HOXD3P31249 432 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-209ENST00000480900 RPS19P39019 145 aaKnown RBP13.22□□□□□ -0.29
HSPG2-209ENST00000480900 KRTAP10-11P60412 298 aa13.22□□□□□ -0.29
HSPG2-209ENST00000480900 FXYD3Q14802 87 aa13.22□□□□□ -0.29
HSPG2-209ENST00000480900 LFNGQ8NES3 379 aa13.22□□□□□ -0.29
HSPG2-209ENST00000480900 BEST4Q8NFU0 473 aa13.22□□□□□ -0.29
HSPG2-209ENST00000480900 OR11H1Q8NG94 326 aa13.22□□□□□ -0.29
HSPG2-209ENST00000480900 FAM103A1Q9BTL3 118 aaKnown RBP13.22□□□□□ -0.29
HSPG2-209ENST00000480900 AUNIPQ9H7T9 357 aa13.22□□□□□ -0.29
HSPG2-209ENST00000480900 ARPC1BO15143 372 aaKnown RBP13.21□□□□□ -0.29
HSPG2-209ENST00000480900 TUSC2O75896 110 aa13.21□□□□□ -0.29
HSPG2-209ENST00000480900 LSM3P62310 102 aaKnown RBP13.21□□□□□ -0.29
HSPG2-209ENST00000480900 SSBP2P81877 361 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-209ENST00000480900 GRPEL2Q8TAA5 225 aa13.21□□□□□ -0.29
HSPG2-209ENST00000480900 RBMX2Q9Y388 322 aaKnown RBP13.21□□□□□ -0.29
HSPG2-209ENST00000480900 IGKV1D-13A0A0B4J2D9 117 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 XRCC3O43542 346 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 CRYZL1O95825 349 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 OR8U8P0C7N1 319 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 IGKV1-13P0DP09 117 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 ARPC4P59998 168 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 GNB1P62873 340 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 ZNF616Q08AN1 781 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 PJVKQ0ZLH3 352 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 VMA21Q3ZAQ7 101 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 UBE2NLQ5JXB2 153 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 HOGA1Q86XE5 327 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 GVQW1Q8N7I0 195 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 TEX45Q8NA69 505 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 OR1N2Q8NGR9 330 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 OSR1Q8TAX0 266 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-209ENST00000480900 SLA2Q9H6Q3 261 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 ZMAT5Q9UDW3 170 aaKnown RBP13.2□□□□□ -0.3
HSPG2-209ENST00000480900 PRELID3BQ9Y3B1 194 aa13.2□□□□□ -0.3
HSPG2-209ENST00000480900 SRRM4A7MD48 611 aaKnown RBP13.19□□□□□ -0.3
HSPG2-209ENST00000480900 J3QRK9 145 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 K7EIL1 84 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 CNIH1O95406 144 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 CD40LGP29965 261 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 CBX5P45973 191 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 UBE2KP61086 200 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 ASPHD1Q5U4P2 390 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 KCTD9Q7L273 389 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 OVCH2Q7RTZ1 564 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 CASTOR1Q8WTX7 329 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 KCTD12Q96CX2 325 aaKnown RBP13.19□□□□□ -0.3
HSPG2-209ENST00000480900 S100A16Q96FQ6 103 aaKnown RBP13.19□□□□□ -0.3
HSPG2-209ENST00000480900 OR5B12Q96R08 314 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 FUNDC2Q9BWH2 189 aa13.19□□□□□ -0.3
HSPG2-209ENST00000480900 MRPS7Q9Y2R9 242 aaKnown RBP13.19□□□□□ -0.3
HSPG2-209ENST00000480900 H3BUA1 57 aa13.18□□□□□ -0.3
HSPG2-209ENST00000480900 IGLV2-14P01704 120 aa13.18□□□□□ -0.3
HSPG2-209ENST00000480900 LGALS1P09382 135 aaKnown RBP13.18□□□□□ -0.3
HSPG2-209ENST00000480900 C9orf66Q5T8R8 295 aa13.18□□□□□ -0.3
HSPG2-209ENST00000480900 SAMD12Q8N8I0 201 aa13.18□□□□□ -0.3
HSPG2-209ENST00000480900 OR13F1Q8NGS4 319 aa13.18□□□□□ -0.3
HSPG2-209ENST00000480900 SLC25A46Q96AG3 418 aa13.18□□□□□ -0.3
HSPG2-209ENST00000480900 TMEM68Q96MH6 324 aa13.18□□□□□ -0.3
HSPG2-209ENST00000480900 HSD17B10Q99714 261 aaKnown RBP13.18□□□□□ -0.3
HSPG2-209ENST00000480900 WI2-2373I1.2A0A1W2PRP0 233 aa13.17□□□□□ -0.3
HSPG2-209ENST00000480900 SEC14L6B5MCN3 397 aa13.17□□□□□ -0.3
HSPG2-209ENST00000480900 FCGR3BO75015 233 aa13.17□□□□□ -0.3
HSPG2-209ENST00000480900 PTHLHP12272 177 aa13.17□□□□□ -0.3
HSPG2-209ENST00000480900 TPPP2P59282 170 aa13.17□□□□□ -0.3
HSPG2-209ENST00000480900 DGCR2P98153 550 aa13.17□□□□□ -0.3
HSPG2-209ENST00000480900 EIF4EBP1Q13541 118 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-209ENST00000480900 MSMO1Q15800 293 aa13.17□□□□□ -0.3
HSPG2-209ENST00000480900 PRSS8Q16651 343 aa13.17□□□□□ -0.3
HSPG2-209ENST00000480900 MRGPRG-AS1Q2M3A8 158 aa13.17□□□□□ -0.3
HSPG2-209ENST00000480900 POC5Q8NA72 575 aa13.17□□□□□ -0.3
HSPG2-209ENST00000480900 CREBL2O60519 120 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-209ENST00000480900 TRGV3P03979 118 aa13.16□□□□□ -0.3
HSPG2-209ENST00000480900 FCGR2CP31995 323 aa13.16□□□□□ -0.3
HSPG2-209ENST00000480900 NCS1P62166 190 aa13.16□□□□□ -0.3
HSPG2-209ENST00000480900 RPL30P62888 115 aaKnown RBP13.16□□□□□ -0.3
HSPG2-209ENST00000480900 TMEM69Q5SWH9 247 aa13.16□□□□□ -0.3
HSPG2-209ENST00000480900 OR5AP2Q8NGF4 316 aa13.16□□□□□ -0.3
HSPG2-209ENST00000480900 OR4S2Q8NH73 311 aa13.16□□□□□ -0.3
HSPG2-209ENST00000480900 SNAPC3Q92966 411 aa13.16□□□□□ -0.3
HSPG2-209ENST00000480900 MS4A10Q96PG2 267 aa13.16□□□□□ -0.3
HSPG2-209ENST00000480900 ALX4Q9H161 411 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-209ENST00000480900 LINC01619G3V211 115 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 RAMP3O60896 148 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 BRI3O95415 125 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 PPYP01298 95 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 SAA1P0DJI8 122 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-209ENST00000480900 SMIM18P0DKX4 95 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 AADACP22760 399 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 CDK10Q15131 360 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 ZNF66Q6ZN08 573 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 IDO2Q6ZQW0 420 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 TCTEX1D2Q8WW35 142 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 RHOVQ96L33 236 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 DCUN1D5Q9BTE7 237 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 IFT46Q9NQC8 304 aa13.15□□□□□ -0.3
HSPG2-209ENST00000480900 IGHV4OR15-8A0A075B7B6 117 aa13.14□□□□□ -0.31
HSPG2-209ENST00000480900 A0A087WW49 117 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms