RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 ASCL3Q9NQ33 180 aa1.02□□□□□ -2.25
CALD1-219ENST00000480638 RANBP2P49792 3224 aaKnown RBP1.02□□□□□ -2.25
CALD1-219ENST00000480638 UBR5O95071 2799 aaPredicted RBP1.02□□□□□ -2.25
CALD1-219ENST00000480638 NBEAL1Q6ZS30 2694 aa1.02□□□□□ -2.25
CALD1-219ENST00000480638 ZFYVE26Q68DK2 2539 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 SETBP1Q9Y6X0 1596 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 TXNDC9O14530 226 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 NPYP01303 97 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 GPX2P18283 190 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 CCR2P41597 374 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 GNA12Q03113 381 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 NNATQ16517 81 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 LCN8Q6JVE9 175 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 CPNE2Q96FN4 548 aaPredicted RBP1.01□□□□□ -2.25
CALD1-219ENST00000480638 TMEM208Q9BTX3 173 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 NRBP2Q9NSY0 501 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 TAAR3PQ9P1P4 343 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 SPTBN5Q9NRC6 3674 aaKnown RBP1.01□□□□□ -2.25
CALD1-219ENST00000480638 NCOR1O75376 2440 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 DLG5Q8TDM6 1919 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 AKAP13Q12802 2813 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 TEX15Q9BXT5 2789 aa1.01□□□□□ -2.25
CALD1-219ENST00000480638 BICRAQ9NZM4 1560 aa1□□□□□ -2.25
CALD1-219ENST00000480638 ARHGEF11O15085 1522 aa1□□□□□ -2.25
CALD1-219ENST00000480638 NUP153P49790 1475 aaKnown RBP1□□□□□ -2.25
CALD1-219ENST00000480638 FREM1Q5H8C1 2179 aa1□□□□□ -2.25
CALD1-219ENST00000480638 PCDH15Q96QU1 1955 aa1□□□□□ -2.25
CALD1-219ENST00000480638 F8W036 122 aa1□□□□□ -2.25
CALD1-219ENST00000480638 COPEO14579 308 aa1□□□□□ -2.25
CALD1-219ENST00000480638 IFNGR2P38484 337 aa1□□□□□ -2.25
CALD1-219ENST00000480638 CDK9P50750 372 aaKnown RBP1□□□□□ -2.25
CALD1-219ENST00000480638 CLEC12BQ2HXU8 276 aa1□□□□□ -2.25
CALD1-219ENST00000480638 LGALS9BQ3B8N2 356 aa1□□□□□ -2.25
CALD1-219ENST00000480638 C1orf174Q8IYL3 243 aa1□□□□□ -2.25
CALD1-219ENST00000480638 LRRC34Q8IZ02 419 aa1□□□□□ -2.25
CALD1-219ENST00000480638 OR51T1Q8NGJ9 327 aa1□□□□□ -2.25
CALD1-219ENST00000480638 TLCD1Q96CP7 247 aa1□□□□□ -2.25
CALD1-219ENST00000480638 KLK5Q9Y337 293 aaPredicted RBP1□□□□□ -2.25
CALD1-219ENST00000480638 POLQO75417 2590 aa1□□□□□ -2.25
CALD1-219ENST00000480638 GRIN2BQ13224 1484 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 CEP164Q9UPV0 1460 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 RYR3Q15413 4870 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 WDR90Q96KV7 1748 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 CFL1P23528 166 aaKnown RBP0.99□□□□□ -2.25
CALD1-219ENST00000480638 AKR1C3P42330 323 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 GABRA2P47869 451 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 STOML3Q8TAV4 291 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 RNASE6Q93091 150 aaKnown RBP0.99□□□□□ -2.25
CALD1-219ENST00000480638 SFRP2Q96HF1 295 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 DOHHQ9BU89 302 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 PKD1L1Q8TDX9 2849 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 MYH11P35749 1972 aa0.99□□□□□ -2.25
CALD1-219ENST00000480638 FLNAP21333 2647 aaKnown RBP0.99□□□□□ -2.25
CALD1-219ENST00000480638 C2CD3Q4AC94 2353 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 CHD5Q8TDI0 1954 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 CENPFP49454 3210 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 IGKV3-7A0A075B6H7 116 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 MEIKINA0A087WXM9 373 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 TRAV8-1A0A0A6YYK1 113 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 M0R381 172 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 RPL27AP46776 148 aaKnown RBP0.98□□□□□ -2.25
CALD1-219ENST00000480638 H2BFSP57053 126 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 SNAP25P60880 206 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 BTN3A2P78410 334 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 SLC36A2Q495M3 483 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 BAP18Q8IXM2 172 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 PACRGLQ8N7B6 248 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 OR52E4Q8NGH9 312 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 OR1L8Q8NGR8 309 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 SLC7A6Q92536 515 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 ZNF75CPQ92670 426 aaPredicted RBP0.98□□□□□ -2.25
CALD1-219ENST00000480638 TMEM222Q9H0R3 208 aa0.98□□□□□ -2.25
CALD1-219ENST00000480638 GOLGB1Q14789 3259 aaKnown RBP0.98□□□□□ -2.25
CALD1-219ENST00000480638 TLN1Q9Y490 2541 aaKnown RBP0.97□□□□□ -2.25
CALD1-219ENST00000480638 FBN2P35556 2912 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 ATRQ13535 2644 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 GOLGA8RI6L899 631 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 PLA2G10O15496 165 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 MRPS14O60783 128 aaKnown RBP0.97□□□□□ -2.25
CALD1-219ENST00000480638 CRPP02741 224 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 ATP5G1P05496 136 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 CTAG1AP78358 180 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 AADACL4Q5VUY2 407 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 LYZL1Q6UWQ5 148 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 FP248Q71RG6 208 aaPredicted RBP0.97□□□□□ -2.25
CALD1-219ENST00000480638 KTN1-AS1Q86SY8 53 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 BLIDQ8IZY5 108 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 ATP6V1C2Q8NEY4 427 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 Q8WTZ3 238 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 TTTY13Q9BZ97 58 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 METTL9Q9H1A3 318 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 PARVAQ9NVD7 372 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 EMC3Q9P0I2 261 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 POLR3HQ9Y535 204 aaPredicted RBP0.97□□□□□ -2.25
CALD1-219ENST00000480638 SPTAN1Q13813 2472 aaKnown RBP0.97□□□□□ -2.25
CALD1-219ENST00000480638 LRP5O75197 1615 aa0.97□□□□□ -2.25
CALD1-219ENST00000480638 MYOFQ9NZM1 2061 aa0.96□□□□□ -2.25
CALD1-219ENST00000480638 TMEM94Q12767 1356 aa0.96□□□□□ -2.26
CALD1-219ENST00000480638 SPG11Q96JI7 2443 aa0.96□□□□□ -2.26
CALD1-219ENST00000480638 ZDBF2Q9HCK1 2354 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms