RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 IFNA21P01568 189 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 RRASP10301 218 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 PAX6P26367 422 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 MC5RP33032 325 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 CD83Q01151 205 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 RTL8BQ17RB0 113 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 KLF17Q5JT82 389 aaPredicted RBP14.19□□□□□ -0.14
UPF3A-206ENST00000480362 GGNBP1Q5YKI7 109 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 AKAP14Q86UN6 197 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 OR5M8Q8NGP6 311 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 MALSU1Q96EH3 234 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 AJUBAQ96IF1 538 aa14.19□□□□□ -0.14
UPF3A-206ENST00000480362 IGHV3-72A0A0B4J1Y9 119 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 PIGBOS1A0A0B4J2F0 54 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 DUXBA0A1W2PPF3 345 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 C5orf51A6NDU8 294 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 MPTX1A8MV57 137 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 PFDN1O60925 122 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 CRYZL1O95825 349 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 GSG1LQ6UXU4 331 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 BRD3OSQ6XYD6 125 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 OR8H3Q8N146 312 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 NEURL2Q9BR09 285 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 CHIAQ9BZP6 476 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 ZNF436Q9C0F3 470 aaPredicted RBP14.18□□□□□ -0.14
UPF3A-206ENST00000480362 PLEKHA2Q9HB19 425 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 WASHC3Q9Y3C0 194 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 TMED3Q9Y3Q3 217 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 VPS13CQ709C8 3753 aa14.18□□□□□ -0.14
UPF3A-206ENST00000480362 TIMM23O14925 209 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 KRASP01116 189 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 IGKV1-5P01602 117 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 IGKV1-16P04430 117 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 VDAC1P21796 283 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 G6PCP35575 357 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 H2BFSP57053 126 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 DHRS7BQ6IAN0 325 aaPredicted RBP14.17□□□□□ -0.14
UPF3A-206ENST00000480362 CCDC144NLQ6NUI1 221 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 PDPNQ86YL7 162 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 RNASE11Q8TAA1 199 aaKnown RBP14.17□□□□□ -0.14
UPF3A-206ENST00000480362 R3HDM4Q96D70 268 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 WDR89Q96FK6 387 aaPredicted RBP14.17□□□□□ -0.14
UPF3A-206ENST00000480362 SEC22AQ96IW7 307 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 ST6GAL2Q96JF0 529 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 OR10C1Q96KK4 312 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 COMMD9Q9P000 198 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 ITPR2Q14571 2701 aa14.17□□□□□ -0.14
UPF3A-206ENST00000480362 A0A0G2JRQ6 117 aa14.16□□□□□ -0.14
UPF3A-206ENST00000480362 ATG12O94817 140 aa14.16□□□□□ -0.14
UPF3A-206ENST00000480362 RAB13P51153 203 aa14.16□□□□□ -0.14
UPF3A-206ENST00000480362 AKR1C2P52895 323 aa14.16□□□□□ -0.14
UPF3A-206ENST00000480362 TMEM177Q53S58 311 aa14.16□□□□□ -0.14
UPF3A-206ENST00000480362 CFHR4Q92496 578 aa14.16□□□□□ -0.14
UPF3A-206ENST00000480362 LSM10Q969L4 123 aaKnown RBP14.16□□□□□ -0.14
UPF3A-206ENST00000480362 GPR146Q96CH1 333 aa14.16□□□□□ -0.14
UPF3A-206ENST00000480362 FLYWCH2Q96CP2 140 aaKnown RBP14.16□□□□□ -0.14
UPF3A-206ENST00000480362 RRNAD1Q96FB5 475 aaKnown RBP14.16□□□□□ -0.14
UPF3A-206ENST00000480362 PDCD10Q9BUL8 212 aa14.16□□□□□ -0.14
UPF3A-206ENST00000480362 RANGRFQ9HD47 186 aaPredicted RBP14.16□□□□□ -0.14
UPF3A-206ENST00000480362 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.15□□□□□ -0.142e-8■■■■□ 23.5
UPF3A-206ENST00000480362 SHOXO15266 292 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 CD5LO43866 347 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 OR2A4O95047 310 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 NQO2P16083 231 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 CD1BP29016 333 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 RPS16P62249 146 aaKnown RBP14.15□□□□□ -0.14
UPF3A-206ENST00000480362 KRTAP1-1Q07627 177 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 CD300CQ08708 224 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 HABP2Q14520 560 aaPredicted RBP14.15□□□□□ -0.14
UPF3A-206ENST00000480362 IZUMO4Q1ZYL8 232 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 NMSQ5H8A3 153 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 OSR1Q8TAX0 266 aaPredicted RBP14.15□□□□□ -0.14
UPF3A-206ENST00000480362 C2orf50Q96LR7 162 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 FYTTD1Q96QD9 318 aaKnown RBP14.15□□□□□ -0.14
UPF3A-206ENST00000480362 OR2A7Q96R45 310 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 MMP24Q9Y5R2 645 aa14.15□□□□□ -0.14
UPF3A-206ENST00000480362 A0A0U1RQK1 487 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 MARCH11A6NNE9 402 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 VENTXO95231 258 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 HRASP01112 189 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 FSHBP01225 129 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 ERVK-16P61578 105 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 SRSF4Q08170 494 aaKnown RBP14.14□□□□□ -0.15
UPF3A-206ENST00000480362 IAH1Q2TAA2 248 aaPredicted RBP14.14□□□□□ -0.15
UPF3A-206ENST00000480362 SSX9Q7RTT3 188 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 H2BFWTQ7Z2G1 175 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 VKORC1L1Q8N0U8 176 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 DMBX1Q8NFW5 382 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 OR4C13Q8NGP0 309 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 NANPQ8TBE9 248 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 RITA1Q96K30 269 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 HARBI1Q96MB7 349 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 NUP50Q9UKX7 468 aa14.14□□□□□ -0.15
UPF3A-206ENST00000480362 SOX21Q9Y651 276 aaPredicted RBP14.14□□□□□ -0.15
UPF3A-206ENST00000480362 SRRM4A7MD48 611 aaKnown RBP14.13□□□□□ -0.15
UPF3A-206ENST00000480362 GIPP09681 153 aaPredicted RBP14.13□□□□□ -0.15
UPF3A-206ENST00000480362 CD24P25063 80 aa14.13□□□□□ -0.15
UPF3A-206ENST00000480362 ARHGDIBP52566 201 aa14.13□□□□□ -0.15
UPF3A-206ENST00000480362 BPIFB3P59826 476 aa14.13□□□□□ -0.15
UPF3A-206ENST00000480362 Q6ZRM9 215 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms