RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 OR2B11Q5JQS5 317 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 C22orf42Q6IC83 251 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 LCN12Q6JVE5 192 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 CD200R1LQ6Q8B3 271 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 ADAMTSL5Q6ZMM2 481 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 HAPLN4Q86UW8 402 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 ZNF383Q8NA42 475 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 FBLIM1Q8WUP2 373 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 TCTEX1D2Q8WW35 142 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 CYYR1Q96J86 154 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 TMEM68Q96MH6 324 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 EDA2RQ9HAV5 297 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 PEMTQ9UBM1 199 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 NKX1-2Q9UD57 310 aaPredicted RBP5.47□□□□□ -1.53
COL17A1-205ENST00000480127 ZNF230Q9UIE0 474 aaPredicted RBP5.47□□□□□ -1.53
COL17A1-205ENST00000480127 LSM2Q9Y333 95 aaKnown RBP5.47□□□□□ -1.53
COL17A1-205ENST00000480127 FBXO7Q9Y3I1 522 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 MSGN1A6NI15 193 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 IFITM5A6NNB3 132 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 H3BUA1 57 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 FCGR3BO75015 233 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 SCGNO76038 276 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 DHFRP00374 187 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 DEFA4P12838 97 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 CRHBPP24387 322 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 SYNJ2BPP57105 145 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 DEFA5Q01523 94 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 ATP5G2Q06055 141 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 GUCA2BQ16661 112 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 ASPHD1Q5U4P2 390 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 LAIR2Q6ISS4 152 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 ACSM6Q6P461 480 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 ZNF880Q6PDB4 577 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 TMEM91Q6ZNR0 172 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 IDO2Q6ZQW0 420 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 KCTD9Q7L273 389 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 SLC25A42Q86VD7 318 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 SNAPC3Q92966 411 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 ISOC1Q96CN7 298 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 FYTTD1Q96QD9 318 aaKnown RBP5.46□□□□□ -1.54
COL17A1-205ENST00000480127 SPIN2AQ99865 258 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 SPIN2BQ9BPZ2 258 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 TPSG1Q9NRR2 321 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 SDHAF2Q9NX18 166 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 PEF1Q9UBV8 284 aaKnown RBP5.46□□□□□ -1.54
COL17A1-205ENST00000480127 DAPK2Q9UIK4 370 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 SSR3Q9UNL2 185 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 NUBP2Q9Y5Y2 271 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 LYSTQ99698 3801 aa5.46□□□□□ -1.54
COL17A1-205ENST00000480127 TRAV1-2A0A0B4J238 106 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 LOC100506127A0A0U1RQW1 187 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 TRIM64CA6NLI5 447 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 LDLRAD4O15165 306 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 CYB5BO43169 146 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 SOX15O60248 233 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 SLC22A5O76082 557 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 TPPPO94811 219 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 CTXN2P0C2S0 81 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 OR9G9P0C7N8 305 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 RAB6AP20340 208 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 OR10A3P58181 314 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 LINC00205P59089 165 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 QRFPP83859 136 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 RHOGP84095 191 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 PJVKQ0ZLH3 352 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 EXOSC2Q13868 293 aaKnown RBP5.45□□□□□ -1.54
COL17A1-205ENST00000480127 IRF3Q14653 427 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 TBCEQ15813 527 aaPredicted RBP5.45□□□□□ -1.54
COL17A1-205ENST00000480127 CDNFQ49AH0 187 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 PLAC9Q5JTB6 97 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 LYPD6Q86Y78 171 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 FAM89BQ8N5H3 189 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 TSPAN14Q8NG11 270 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 OR9G4Q8NGQ1 327 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 OR4S2Q8NH73 311 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 OSR1Q8TAX0 266 aaPredicted RBP5.45□□□□□ -1.54
COL17A1-205ENST00000480127 MYOZ3Q8TDC0 251 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 PTX4Q96A99 478 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 USMG5Q96IX5 58 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 TM2D3Q9BRN9 247 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 AGMATQ9BSE5 352 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 DUSP21Q9H596 190 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 HRASLSQ9HDD0 168 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 SLC2A8Q9NY64 477 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 SPATA2Q9UM82 520 aa5.45□□□□□ -1.54
COL17A1-205ENST00000480127 CSMD3Q7Z407 3707 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 IGKV1-6A0A0C4DH72 117 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 ZNF320A2RRD8 509 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 TMEM235A6NFC5 223 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 FAM223BA6NKX1 122 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 NOTOA8MTQ0 251 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 RAB27BO00194 218 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 DIRAS3O95661 229 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 IGHV4-30-4P0DP06 118 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 EGR2P11161 476 aaPredicted RBP5.44□□□□□ -1.54
COL17A1-205ENST00000480127 NFYAP23511 347 aaPredicted RBP5.44□□□□□ -1.54
COL17A1-205ENST00000480127 CRIP2P52943 208 aaPredicted RBP5.44□□□□□ -1.54
COL17A1-205ENST00000480127 TMEM50BP56557 158 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 CD81P60033 236 aa5.44□□□□□ -1.54
COL17A1-205ENST00000480127 UBE2KP61086 200 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms