RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TMEM41BQ5BJD5 291 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 IDO2Q6ZQW0 420 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 STHQ8IWL8 128 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 CPNE2Q96FN4 548 aaPredicted RBP8.34□□□□□ -1.07
USP11-208ENST00000480104 NSMCE2Q96MF7 247 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 FANCD2OSQ96PS1 177 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 RNF2Q99496 336 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 SPIN2AQ99865 258 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 SPIN2BQ9BPZ2 258 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 ZNF436Q9C0F3 470 aaPredicted RBP8.34□□□□□ -1.07
USP11-208ENST00000480104 METTL9Q9H1A3 318 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 SPACA1Q9HBV2 294 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 FRRS1LQ9P0K9 344 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 ZNF257Q9Y2Q1 563 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 ETV7Q9Y603 341 aa8.34□□□□□ -1.07
USP11-208ENST00000480104 IGHV3OR16-8A0A075B7F1 116 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 MFSD2BA6NFX1 497 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 M0R129 80 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 ZNF207O43670 478 aaKnown RBP8.33□□□□□ -1.08
USP11-208ENST00000480104 IFNA5P01569 189 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 SPART-AS1P0CW21 52 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 NANOS3P60323 173 aaKnown RBP8.33□□□□□ -1.08
USP11-208ENST00000480104 SSX9Q7RTT3 188 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 CEACAM19Q7Z692 300 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 SLC25A42Q86VD7 318 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 GBGT1Q8N5D6 347 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 OR51A2Q8NGJ7 313 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 OR5D14Q8NGL3 314 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 MRPL30Q8TCC3 161 aaKnown RBP8.33□□□□□ -1.08
USP11-208ENST00000480104 NSL1Q96IY1 281 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 SIKE1Q9BRV8 207 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 REEP1Q9H902 201 aa8.33□□□□□ -1.08
USP11-208ENST00000480104 UBE2QL1A1L167 161 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 HMX3A6NHT5 357 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 PRKYO43930 277 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 CA11O75493 328 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 GPX5O75715 221 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 SC5DO75845 299 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 OXTP01178 125 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 PLA2G1BP04054 148 aaKnown RBP8.32□□□□□ -1.08
USP11-208ENST00000480104 SOX2P48431 317 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 EMP1P54849 157 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 DEFB131AP59861 70 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 PSME3P61289 254 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 HMGN3Q15651 99 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 FAM220AQ7Z4H9 259 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 CSNK1G2-AS1Q8NCQ2 148 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 OR10H4Q8NGA5 316 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 DYDC1Q8WWB3 177 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 TEX12Q9BXU0 123 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 PEX16Q9Y5Y5 336 aa8.32□□□□□ -1.08
USP11-208ENST00000480104 TRBV5-7A0A0A0MS05 114 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 TRBV7-1A0A0A6YYK4 115 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 CCDC22O60826 627 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 SPP1P10451 314 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 COX4I1P13073 169 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 OSMP13725 252 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 CAPGP40121 348 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 TTC32Q5I0X7 151 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 OR2T5Q6IEZ7 315 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 PLET1Q6UQ28 207 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 HACD2Q6Y1H2 254 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 TRPT1Q86TN4 253 aaKnown RBP8.31□□□□□ -1.08
USP11-208ENST00000480104 PARP16Q8N5Y8 322 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 OR2T29Q8NH02 315 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 GIPC3Q8TF64 312 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 OR2A7Q96R45 310 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 C20orf24Q9BUV8 137 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 C11orf54Q9H0W9 315 aaPredicted RBP8.31□□□□□ -1.08
USP11-208ENST00000480104 LINC00588Q9Y4M8 146 aa8.31□□□□□ -1.08
USP11-208ENST00000480104 NPIPB5A8MRT5 1133 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 TEX22C9J3V5 150 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 M0R1X1 148 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 DYNC1I1O14576 645 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 EDF1O60869 148 aaKnown RBP8.3□□□□□ -1.08
USP11-208ENST00000480104 OR2T7P0C7T2 308 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 GTF2F2P13984 249 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 RAB3AP20336 220 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 TAGLNQ01995 201 aaKnown RBP8.3□□□□□ -1.08
USP11-208ENST00000480104 VMA21Q3ZAQ7 101 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 AADACL4Q5VUY2 407 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 TEX45Q8NA69 505 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 GIMAP1Q8WWP7 306 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 ZNF430Q9H8G1 570 aaPredicted RBP8.3□□□□□ -1.08
USP11-208ENST00000480104 ISG20L2Q9H9L3 353 aaKnown RBP8.3□□□□□ -1.08
USP11-208ENST00000480104 ABRACLQ9P1F3 81 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 AASSQ9UDR5 926 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 GMPPBQ9Y5P6 360 aa8.3□□□□□ -1.08
USP11-208ENST00000480104 ITGB1BP1O14713 200 aa8.29□□□□□ -1.08
USP11-208ENST00000480104 ACTL6BO94805 426 aa8.29□□□□□ -1.08
USP11-208ENST00000480104 UBE2KP61086 200 aa8.29□□□□□ -1.08
USP11-208ENST00000480104 PTGES3Q15185 160 aaKnown RBP8.29□□□□□ -1.08
USP11-208ENST00000480104 WDR93Q6P2C0 686 aa8.29□□□□□ -1.08
USP11-208ENST00000480104 FAM24BQ8N5W8 94 aa8.29□□□□□ -1.08
USP11-208ENST00000480104 ZNF502Q8TBZ5 544 aa8.29□□□□□ -1.08
USP11-208ENST00000480104 ANP32BQ92688 251 aaKnown RBP8.29□□□□□ -1.08
USP11-208ENST00000480104 NIPSNAP3BQ9BS92 247 aa8.29□□□□□ -1.08
USP11-208ENST00000480104 Q9H3A6 140 aa8.29□□□□□ -1.08
USP11-208ENST00000480104 EFCAB1Q9HAE3 211 aa8.29□□□□□ -1.08
USP11-208ENST00000480104 PAK1IP1Q9NWT1 392 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms