RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 STPG2Q8N412 459 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 TMEM252Q8N6L7 170 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 KIR3DL3Q8N743 410 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 ZNF383Q8NA42 475 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 BEND2Q8NDZ0 799 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 OR52E5Q8NH55 327 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 CIB3Q96Q77 187 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-204ENST00000480057 PCGF1Q9BSM1 259 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 ARV1Q9H2C2 271 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 ADGRG4Q8IZF6 3080 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 NBEAQ8NFP9 2946 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 IGSF10Q6WRI0 2623 aa9.01□□□□□ -0.97
VTI1A-204ENST00000480057 A0A1W2PPE3 182 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 FAM24AA6NFZ4 105 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 M0R1W7 72 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 TXNL1O43396 289 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 IGHV3-7P01780 117 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 APOA2P02652 100 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 PRB1P04280 392 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 NMBP08949 121 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 CT45A6P0DMU7 189 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 CT45A5P0DMU8 189 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 CT45A7P0DMV0 189 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 CDKN1AP38936 164 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 CAV2P51636 162 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 PRRX1P54821 245 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 ERVFRD-1P60508 538 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 UBE2KP61086 200 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 ZNF266Q14584 549 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 C1orf229Q6ZS94 237 aaPredicted RBP9□□□□□ -0.97
VTI1A-204ENST00000480057 C1orf122Q6ZSJ8 110 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 PDZD9Q8IXQ8 264 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 SLC7A5P1Q8MH63 180 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 ABHD12Q8N2K0 398 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 OR5AN1Q8NGI8 311 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 ST6GALNAC6Q969X2 333 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 SSBP3Q9BWW4 388 aaPredicted RBP9□□□□□ -0.97
VTI1A-204ENST00000480057 MAGT1Q9H0U3 335 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 CACNA1BQ00975 2339 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 ABCA4P78363 2273 aa9□□□□□ -0.97
VTI1A-204ENST00000480057 USF3Q68DE3 2245 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 IGSF23A1L1A6 192 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 DFFBO76075 338 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 LY6HO94772 140 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 TMEM50AO95807 157 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 MC5RP33032 325 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 SULT1A1P50225 295 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 IZUMO4Q1ZYL8 232 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 RPL7L1Q6DKI1 246 aaKnown RBP8.99□□□□□ -0.97
VTI1A-204ENST00000480057 ZNF429Q86V71 674 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 STX12Q86Y82 276 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 PDPNQ86YL7 162 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 ZNF295-AS1Q8N0V1 137 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 OR10X1Q8NGY0 326 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 OSR1Q8TAX0 266 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-204ENST00000480057 GINS3Q9BRX5 216 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 BARX1Q9HBU1 254 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-204ENST00000480057 SLC35D1Q9NTN3 355 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 PSENENQ9NZ42 101 aa8.99□□□□□ -0.97
VTI1A-204ENST00000480057 AMMECR1Q9Y4X0 333 aaPredicted RBP8.99□□□□□ -0.97
VTI1A-204ENST00000480057 SPTBN1Q01082 2364 aaKnown RBP8.98□□□□□ -0.97
VTI1A-204ENST00000480057 LOC105371242A0A075B767 164 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 IGHV2-26A0A0B4J1V2 119 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 A8MXK9 166 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 FGF16O43320 207 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 CRYZL1O95825 349 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 IGLV1-47P01700 117 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 IL6RP08887 468 aaPredicted RBP8.98□□□□□ -0.97
VTI1A-204ENST00000480057 FGF2P09038 288 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 SEC11BP0C7V7 166 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 PDLIM4P50479 330 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 RAB13P51153 203 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 LINC00205P59089 165 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 SPCS3P61009 180 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 NHLH2Q02577 135 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 TMEM177Q53S58 311 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 OR1S2Q8NGQ3 325 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 OR4A16Q8NH70 328 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 RNF141Q8WVD5 230 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 CLEC7AQ9BXN2 247 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 RBKSQ9H477 322 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 TMEM140Q9NV12 185 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 BET1LQ9NYM9 111 aa8.98□□□□□ -0.97
VTI1A-204ENST00000480057 FOXA2Q9Y261 457 aaPredicted RBP8.98□□□□□ -0.97
VTI1A-204ENST00000480057 C15orf61A6NNL5 157 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 C22orf46C9J442 243 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 H0YJW9 148 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 NDUFS8O00217 210 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 ENSAO43768 121 aaKnown RBP8.97□□□□□ -0.97
VTI1A-204ENST00000480057 KALRNO60229 2985 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 IGHV2-5P01817 119 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 OR9G9P0C7N8 305 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 RNF224P0DH78 156 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 HBG1P69891 147 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 HBG2P69892 147 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 RPP30P78346 268 aaKnown RBP8.97□□□□□ -0.97
VTI1A-204ENST00000480057 RELBQ01201 579 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 HLA-DRB5Q30154 266 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 TMEM14EPQ6UXP3 125 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 TGIF2LXQ8IUE1 241 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms