RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 C6orf201Q7Z4U5 140 aa7.16□□□□□ -1.26
GPNMB-211ENST00000479625 FAM223AQ8IWN6 122 aa7.16□□□□□ -1.26
GPNMB-211ENST00000479625 TMEM217Q8N7C4 229 aa7.16□□□□□ -1.26
GPNMB-211ENST00000479625 SRSF12Q8WXF0 261 aaKnown RBP7.16□□□□□ -1.26
GPNMB-211ENST00000479625 THRSPQ92748 146 aa7.16□□□□□ -1.26
GPNMB-211ENST00000479625 HARBI1Q96MB7 349 aa7.16□□□□□ -1.26
GPNMB-211ENST00000479625 TMEM68Q96MH6 324 aa7.16□□□□□ -1.26
GPNMB-211ENST00000479625 FAAP24Q9BTP7 215 aa7.16□□□□□ -1.26
GPNMB-211ENST00000479625 OAZ3Q9UMX2 235 aa7.16□□□□□ -1.26
GPNMB-211ENST00000479625 S4R3C0 116 aa7.16□□□□□ -1.26
GPNMB-211ENST00000479625 TRBV9A0A0B4J1U6 114 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 PRSS29PA6NIE9 313 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 M0R1X1 148 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 LGALS9O00182 355 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 GGCTO75223 188 aaKnown RBP7.15□□□□□ -1.26
GPNMB-211ENST00000479625 S1PR2O95136 353 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 GLAP06280 429 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 LIMS3P0CW19 117 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 LIMS4P0CW20 117 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 SNRPGP62308 76 aaKnown RBP7.15□□□□□ -1.26
GPNMB-211ENST00000479625 RBMS2Q15434 407 aaKnown RBP7.15□□□□□ -1.26
GPNMB-211ENST00000479625 C15orf32Q32M92 178 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 SLC25A30Q5SVS4 291 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 C10orf55Q5SWW7 151 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 MEDAGQ5VYS4 303 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 ZNF880Q6PDB4 577 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 IDO2Q6ZQW0 420 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 ZNF575Q86XF7 245 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 UXS1Q8NBZ7 420 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 OR52I1Q8NGK6 324 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 C2CD4CQ8TF44 421 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 TRUB1Q8WWH5 349 aaKnown RBP7.15□□□□□ -1.26
GPNMB-211ENST00000479625 ACOT12Q8WYK0 555 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 HDHD3Q9BSH5 251 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-211ENST00000479625 KCNK15Q9H427 330 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 CHMP1AQ9HD42 196 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-211ENST00000479625 APLNQ9ULZ1 77 aa7.15□□□□□ -1.26
GPNMB-211ENST00000479625 TRBV5-5A0A0J9YX44 114 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 ZNF320A2RRD8 509 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 SRRM4A7MD48 611 aaKnown RBP7.14□□□□□ -1.27
GPNMB-211ENST00000479625 A8MWP6 167 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 ITGB1BP1O14713 200 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 RTL8CO15255 209 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 NAPSAO96009 420 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 LALBAP00709 142 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 GABRB1P18505 474 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 CEACAM6P40199 344 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 HLA-DRB3P79483 266 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 TAGLNQ01995 201 aaKnown RBP7.14□□□□□ -1.27
GPNMB-211ENST00000479625 ANKRD55Q3KP44 614 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 ZIK1Q3SY52 487 aaPredicted RBP7.14□□□□□ -1.27
GPNMB-211ENST00000479625 OR2G6Q5TZ20 316 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 OR10K2Q6IF99 312 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 RPL22L1Q6P5R6 122 aaKnown RBP7.14□□□□□ -1.27
GPNMB-211ENST00000479625 GVQW1Q8N7I0 195 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 STPG3Q8N7X2 389 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 OR1L6Q8NGR2 347 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 C11orf45Q8TAV5 145 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 C5orf30Q96GV9 206 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 CCDC140Q96MF4 163 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 NICN1Q9BSH3 213 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 LRRC42Q9Y546 428 aa7.14□□□□□ -1.27
GPNMB-211ENST00000479625 IGLL5B9A064 214 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 UBE2CO00762 179 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 DYNC1I1O14576 645 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 DEFB4AO15263 64 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 SHOXO15266 292 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 BPNT1O95861 308 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 IFNA4P05014 189 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 ARL3P36405 182 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 CAPGP40121 348 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 RPS11P62280 158 aaKnown RBP eCLIP7.13□□□□□ -1.27
GPNMB-211ENST00000479625 ODF3L2Q3SX64 289 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 CLEC19AQ6UXS0 136 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 UNQ9165/PRO28630Q6UXU0 137 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 ZFP41Q8N8Y5 198 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 NECAP1Q8NC96 275 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 SMIM19Q96E16 107 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 MYCBPQ99417 103 aaPredicted RBP7.13□□□□□ -1.27
GPNMB-211ENST00000479625 CKLFQ9UBR5 152 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 ZNF221Q9UK13 617 aa7.13□□□□□ -1.27
GPNMB-211ENST00000479625 EXOSC1Q9Y3B2 195 aaKnown RBP7.13□□□□□ -1.27
GPNMB-211ENST00000479625 IGKV1-6A0A0C4DH72 117 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 KIR2DL5BA0A0G2JN68 375 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 KIR2DL5BA0A0G2JPC4 375 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 SNTNA6NMZ2 147 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 GYG2O15488 501 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 SCTP09683 121 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 ZBTB25P24278 435 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 HTR2CP28335 458 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 ETV1P50549 477 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 PRSS8Q16651 343 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 Q499Y3 187 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 DNAL1Q4LDG9 190 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 CCDC58Q4VC31 144 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 TMEM177Q53S58 311 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 RBPMS2Q6ZRY4 209 aaKnown RBP7.12□□□□□ -1.27
GPNMB-211ENST00000479625 MOB1BQ7L9L4 216 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 CEACAM19Q7Z692 300 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms