RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 TNFRSF19Q9NS68 423 aa7.1□□□□□ -1.27
DDX56-211ENST00000479602 LIN7CQ9NUP9 197 aaKnown RBP7.1□□□□□ -1.27
DDX56-211ENST00000479602 COMMD9Q9P000 198 aa7.1□□□□□ -1.27
DDX56-211ENST00000479602 COPZ2Q9P299 210 aa7.1□□□□□ -1.27
DDX56-211ENST00000479602 WASHC3Q9Y3C0 194 aa7.1□□□□□ -1.27
DDX56-211ENST00000479602 FAM172BPA6NC97 362 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 H3BUX3 64 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 UPK1BO75841 260 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 MOSP00540 346 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 APOA2P02652 100 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 CRIP2P52943 208 aaPredicted RBP7.09□□□□□ -1.27
DDX56-211ENST00000479602 TSPAN5P62079 268 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 ASAH1Q13510 395 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 RBMS2Q15434 407 aaKnown RBP7.09□□□□□ -1.27
DDX56-211ENST00000479602 BAK1Q16611 211 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 LTC4SQ16873 150 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 ZNF383Q8NA42 475 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 OR13C8Q8NGS7 320 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 UBALD1Q8TB05 177 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 WIPF2Q8TF74 440 aaPredicted RBP7.09□□□□□ -1.27
DDX56-211ENST00000479602 MRPL20Q9BYC9 149 aaKnown RBP7.09□□□□□ -1.27
DDX56-211ENST00000479602 ALX4Q9H161 411 aaPredicted RBP7.09□□□□□ -1.27
DDX56-211ENST00000479602 PLEKHA2Q9HB19 425 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 HRASLSQ9HDD0 168 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 GPR132Q9UNW8 380 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 MOB4Q9Y3A3 225 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 PRELID3BQ9Y3B1 194 aa7.09□□□□□ -1.27
DDX56-211ENST00000479602 MEIS3P1A6NDR6 274 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 CENPXA8MT69 81 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 TSPAN15O95858 294 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 HLA-DRB1P01911 266 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 PMP2P02689 132 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 AMY2AP04746 511 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 F2RP25116 425 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 SLC6A1P30531 599 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 BTCP35070 178 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 DIAPH2-AS1Q14236 149 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 RTL8BQ17RB0 113 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 BEAN1Q3B7T3 259 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 FBLN7Q53RD9 439 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 FAM53AQ6NSI3 398 aaPredicted RBP7.08□□□□□ -1.28
DDX56-211ENST00000479602 ZNF818PQ6ZRF7 136 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 C5orf24Q7Z6I8 188 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 PDZD9Q8IXQ8 264 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 CCDC71LQ8N9Z2 235 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 OR4D10Q8NGI6 311 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 OR4S2Q8NH73 311 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 OR56B4Q8NH76 319 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 IL22RA2Q969J5 263 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 EAF1Q96JC9 268 aaPredicted RBP7.08□□□□□ -1.28
DDX56-211ENST00000479602 TSNAXQ99598 290 aaKnown RBP7.08□□□□□ -1.28
DDX56-211ENST00000479602 NPFFR1Q9GZQ6 430 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 SLC5A7Q9GZV3 580 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 SLC2A9Q9NRM0 540 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 PLSCR3Q9NRY6 295 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 HILPDAQ9Y5L2 63 aa7.08□□□□□ -1.28
DDX56-211ENST00000479602 A0A1W2PPE3 182 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 LINC00473A8K010 186 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 H0Y980 276 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 M0QYG6 137 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 M0R1X1 148 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 CREBL2O60519 120 aaPredicted RBP7.07□□□□□ -1.28
DDX56-211ENST00000479602 NDUFB6O95139 128 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 BRI3O95415 125 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 SNRNP70P08621 437 aaKnown RBP7.07□□□□□ -1.28
DDX56-211ENST00000479602 IL6RP08887 468 aaPredicted RBP7.07□□□□□ -1.28
DDX56-211ENST00000479602 BRWD1-AS2P59051 145 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 TAS2R31P59538 309 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 UBE2KP61086 200 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 DHODHQ02127 395 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 PRB3Q04118 309 aaPredicted RBP7.07□□□□□ -1.28
DDX56-211ENST00000479602 CBX3Q13185 183 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 AARDQ4LEZ3 155 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 RPL39P5Q59GN2 51 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 SAMD5Q5TGI4 173 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 IDO2Q6ZQW0 420 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 C5orf56Q8N8D9 126 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 TEX45Q8NA69 505 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 OR51S1Q8NGJ8 323 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 OR4A5Q8NH83 315 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 VSTM2AQ8TAG5 236 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 SECTM1Q8WVN6 248 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 CACFD1Q9UGQ2 172 aa7.07□□□□□ -1.28
DDX56-211ENST00000479602 RBM7Q9Y580 266 aaKnown RBP7.07□□□□□ -1.28
DDX56-211ENST00000479602 PLXNB1O43157 2135 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 DUXBA0A1W2PPF3 345 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 A0A1W2PRD5 423 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 A0A1W2PRF3 423 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 A0A1W2PRM7 423 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 CRYM-AS1A6NIL9 109 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 NBR2O15453 112 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 PLA2G10O15496 165 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 LYRM1O43325 122 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 PGLYRP1O75594 196 aaPredicted RBP7.06□□□□□ -1.28
DDX56-211ENST00000479602 HPRT1P00492 218 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 IGKV1D-33P01593 117 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 IGKV1-33P01594 117 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 IGLV2-23P01705 113 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 IGHV3-7P01780 117 aa7.06□□□□□ -1.28
DDX56-211ENST00000479602 IGHG2P01859 326 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms