RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 RNF150Q9ULK6 438 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 INSIG2Q9Y5U4 225 aa5.4□□□□□ -1.54
USP48-208ENST00000479177 NSD1Q96L73 2696 aaPredicted RBP5.4□□□□□ -1.55
USP48-208ENST00000479177 MXRA5Q9NR99 2828 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 HIVEP1P15822 2718 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 A0A0B4J2A0 478 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 RNF212BA8MTL3 300 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 ODF3BA8MYP8 253 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 B4DSR2 109 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 H0Y980 276 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 M0R1X1 148 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 RAB29O14966 203 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 TNFSF12O43508 249 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 PROP1O75360 226 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 DUS4LO95620 317 aaKnown RBP5.39□□□□□ -1.55
USP48-208ENST00000479177 IFNA2P01563 188 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 IGLV1-47P01700 117 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 OR5AC1P0C628 307 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 TRAPPC2P0DI81 140 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 TRAPPC2BP0DI82 140 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 IGHV4-31P0DP07 118 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 F2RP25116 425 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 S100GP29377 79 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 LGALS4P56470 323 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 RRAS2P62070 204 aaPredicted RBP5.39□□□□□ -1.55
USP48-208ENST00000479177 PAX8Q06710 450 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 CBX3Q13185 183 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 KLRD1Q13241 179 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 TMEM187Q14656 261 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 FCN2Q15485 313 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 HLA-DRB5Q30154 266 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 ANKRD55Q3KP44 614 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 RPL39P5Q59GN2 51 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 FAM71F2Q6NXP2 309 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 BTNL3Q6UXE8 466 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 ZNF66Q6ZN08 573 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 ZNF833PQ6ZTB9 187 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 KCTD9Q7L273 389 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 VMO1Q7Z5L0 202 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 LYG1Q8N1E2 194 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 PNKDQ8N490 385 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 C12orf45Q8N5I9 185 aaPredicted RBP5.39□□□□□ -1.55
USP48-208ENST00000479177 BEND2Q8NDZ0 799 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 WFDC11Q8NEX6 87 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 OR11H6Q8NGC7 330 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 OR4P4Q8NGL7 312 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 OR13D1Q8NGV5 346 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 OR51H1Q8NH63 302 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 CASTOR1Q8WTX7 329 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 MITD1Q8WV92 249 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 TP53RKQ96S44 253 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 LIN7CQ9NUP9 197 aaKnown RBP5.39□□□□□ -1.55
USP48-208ENST00000479177 SHPKQ9UHJ6 478 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 GAB2Q9UQC2 676 aa5.39□□□□□ -1.55
USP48-208ENST00000479177 C3orf85A0A1B0GTC6 90 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 HMX3A6NHT5 357 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 LINC00473A8K010 186 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 RNASEK-C17orf49H0YIS7 233 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 TOR1AO14656 332 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 SSNA1O43805 119 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 B3GALNT1O75752 331 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 SULT1A3P0DMM9 295 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 SULT1A4P0DMN0 295 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 ANXA3P12429 323 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 UCP1P25874 307 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 IL3RAP26951 378 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 DUTP33316 252 aaKnown RBP5.38□□□□□ -1.55
USP48-208ENST00000479177 RPL30P62888 115 aaKnown RBP5.38□□□□□ -1.55
USP48-208ENST00000479177 SRPXP78539 464 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 CATR1Q13166 79 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 C2orf68Q2NKX9 166 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 TMEM249Q2WGJ8 235 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 SP6Q3SY56 376 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 NCR3LG1Q68D85 454 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 LIN54Q6MZP7 749 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 C11orf88Q6PI97 169 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 MAPK1IP1LQ8NDC0 245 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 OR10X1Q8NGY0 326 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 COQ8AQ8NI60 647 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 LHFPL5Q8TAF8 219 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 GLYATL2Q8WU03 294 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 TCTEX1D2Q8WW35 142 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 DDB2Q92466 427 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 ST6GALNAC6Q969X2 333 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 TMEM186Q96B77 213 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 MSI2Q96DH6 328 aaKnown RBP5.38□□□□□ -1.55
USP48-208ENST00000479177 S1PR3Q99500 378 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 PHB2Q99623 299 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 HSD17B10Q99714 261 aaKnown RBP5.38□□□□□ -1.55
USP48-208ENST00000479177 PCGF1Q9BSM1 259 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 MRPL20Q9BYC9 149 aaKnown RBP5.38□□□□□ -1.55
USP48-208ENST00000479177 TMEM222Q9H0R3 208 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 MED28Q9H204 178 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 HEXA-AS1Q9H8Q6 139 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 FAM212BQ9NTI7 297 aaPredicted RBP5.38□□□□□ -1.55
USP48-208ENST00000479177 PIPOXQ9P0Z9 390 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 AMMECR1Q9Y4X0 333 aaPredicted RBP5.38□□□□□ -1.55
USP48-208ENST00000479177 TNCP24821 2201 aa5.38□□□□□ -1.55
USP48-208ENST00000479177 LY6LH3BQJ8 138 aa5.37□□□□□ -1.55
USP48-208ENST00000479177 BUB1B-PAK6H3BSN5 160 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms