RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 FOXA1P55317 472 aa3.54□□□□□ -1.84
CDK13-204ENST00000478563 TSPEAR-AS2P59090 65 aa3.54□□□□□ -1.84
CDK13-204ENST00000478563 HOXC5Q00444 222 aa3.54□□□□□ -1.84
CDK13-204ENST00000478563 CDK10Q15131 360 aa3.54□□□□□ -1.84
CDK13-204ENST00000478563 PYCR3Q53H96 274 aa3.54□□□□□ -1.84
CDK13-204ENST00000478563 EIF4E3Q8N5X7 224 aaKnown RBP3.54□□□□□ -1.84
CDK13-204ENST00000478563 OR10X1Q8NGY0 326 aa3.54□□□□□ -1.84
CDK13-204ENST00000478563 SFRP2Q96HF1 295 aa3.54□□□□□ -1.84
CDK13-204ENST00000478563 ULBP3Q9BZM4 244 aa3.54□□□□□ -1.84
CDK13-204ENST00000478563 TRIM4Q9C037 500 aa3.54□□□□□ -1.84
CDK13-204ENST00000478563 DOK5Q9P104 306 aa3.54□□□□□ -1.84
CDK13-204ENST00000478563 KIF26AQ9ULI4 1882 aaPredicted RBP3.54□□□□□ -1.84
CDK13-204ENST00000478563 ZNF638Q14966 1978 aaKnown RBP3.53□□□□□ -1.84
CDK13-204ENST00000478563 PQLC2LA1A4F0 135 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 C15orf65H3BRN8 121 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 IGHV3-30-3P0DP02 117 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 CRYBB3P26998 211 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 RPS11P62280 158 aaKnown RBP eCLIP3.53□□□□□ -1.84
CDK13-204ENST00000478563 TNFAIP6P98066 277 aaPredicted RBP3.53□□□□□ -1.84
CDK13-204ENST00000478563 PSG4Q00888 419 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 RUNX1Q01196 453 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 SLC9A3R2Q15599 337 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 SLC35F6Q8N357 371 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 DAND5Q8N907 189 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 PXT1Q8NFP0 134 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 LMX1AQ8TE12 382 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 AP3S1Q92572 193 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 RNASE6Q93091 150 aaKnown RBP3.53□□□□□ -1.84
CDK13-204ENST00000478563 CNBD2Q96M20 576 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 DUSP21Q9H596 190 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 GPR84Q9NQS5 396 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 SNX12Q9UMY4 172 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 ARL5AQ9Y689 179 aa3.53□□□□□ -1.84
CDK13-204ENST00000478563 UNC13AQ9UPW8 1703 aa3.53□□□□□ -1.85
CDK13-204ENST00000478563 WRNQ14191 1432 aaPredicted RBP eCLIP3.53□□□□□ -1.85
CDK13-204ENST00000478563 OTOFQ9HC10 1997 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 DHX57Q6P158 1386 aaKnown RBP3.52□□□□□ -1.85
CDK13-204ENST00000478563 GGTLC3B5MD39 225 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 CST2P09228 141 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 SLC25A16P16260 332 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 HIST1H1TP22492 207 aaPredicted RBP3.52□□□□□ -1.85
CDK13-204ENST00000478563 MAGEA12P43365 314 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 LY6EQ16553 131 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 LPCAT3Q6P1A2 487 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 RASL11AQ6T310 242 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 AMTNQ6UX39 209 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 SDIM1Q6ZPB5 146 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 C20orf196Q8IYI0 205 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 OR11H1Q8NG94 326 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 MGLLQ99685 303 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 UPK3BQ9BT76 320 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 MRPL27Q9P0M9 148 aaKnown RBP3.52□□□□□ -1.85
CDK13-204ENST00000478563 ANGPT4Q9Y264 503 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 PRR14LQ5THK1 2151 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 NLRC5Q86WI3 1866 aa3.52□□□□□ -1.85
CDK13-204ENST00000478563 PCF11O94913 1555 aaKnown RBP3.51□□□□□ -1.85
CDK13-204ENST00000478563 LST1O00453 97 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 UBE2L6O14933 153 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 NOS1APO75052 506 aaPredicted RBP3.51□□□□□ -1.85
CDK13-204ENST00000478563 ZNF189O75820 626 aaPredicted RBP3.51□□□□□ -1.85
CDK13-204ENST00000478563 TTRP02766 147 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 LIN52Q52LA3 116 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 NOXRED1Q6NXP6 359 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 LYPD6Q86Y78 171 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 GPHB5Q86YW7 130 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 SLC22A24Q8N4F4 322 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 C1orf64Q8NEQ6 169 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 OR10A6Q8NH74 314 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 SGMS2Q8NHU3 365 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 BTF3L4Q96K17 158 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 CMSS1Q9BQ75 279 aaKnown RBP3.51□□□□□ -1.85
CDK13-204ENST00000478563 RSPO3Q9BXY4 272 aaPredicted RBP3.51□□□□□ -1.85
CDK13-204ENST00000478563 C11orf1Q9H5F2 150 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 ATPIF1Q9UII2 106 aa3.51□□□□□ -1.85
CDK13-204ENST00000478563 DSCAMO60469 2012 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 GPR179Q6PRD1 2367 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 FAM236DA0A1B0GTK5 79 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 KNCNA6PVL3 124 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 ZNF878C9JN71 531 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 E5RI56 91 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 SLC17A3O00476 420 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 FAM236CP0DP71 79 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 ZNF14P17017 642 aaPredicted RBP3.5□□□□□ -1.85
CDK13-204ENST00000478563 NPPCP23582 126 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 RPL5P46777 297 aaKnown RBP3.5□□□□□ -1.85
CDK13-204ENST00000478563 SERPINB10P48595 397 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 ZNF140P52738 457 aaPredicted RBP3.5□□□□□ -1.85
CDK13-204ENST00000478563 DEFA1P59665 94 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 HIST1H3AP68431 136 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 H3F3AP84243 136 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 IL15RAQ13261 267 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 KCNJ8Q15842 424 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 GLT6D1Q7Z4J2 308 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 H1FOOQ8IZA3 346 aaPredicted RBP3.5□□□□□ -1.85
CDK13-204ENST00000478563 Q8NAQ8 132 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 RPS4Y2Q8TD47 263 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 NMNAT3Q96T66 252 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 SELENOSQ9BQE4 189 aa3.5□□□□□ -1.85
CDK13-204ENST00000478563 ASF1BQ9NVP2 202 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms