RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 RTL8BQ17RB0 113 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 MRGPRG-AS1Q2M3A8 158 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 UNQ5815/PRO19632Q6UWF5 114 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 ZNF645Q8N7E2 425 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 BVESQ8NE79 360 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 HARBI1Q96MB7 349 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 TMEM68Q96MH6 324 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 CLCC1Q96S66 551 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 FAM103A1Q9BTL3 118 aaKnown RBP18.15■□□□□ 0.5
C9orf3-215ENST00000478473 SLA2Q9H6Q3 261 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 SCOCQ9UIL1 159 aa18.15■□□□□ 0.5
C9orf3-215ENST00000478473 RBM7Q9Y580 266 aaKnown RBP18.15■□□□□ 0.5
C9orf3-215ENST00000478473 LINC00473A8K010 186 aa18.14■□□□□ 0.49
C9orf3-215ENST00000478473 H3BUA1 57 aa18.14■□□□□ 0.49
C9orf3-215ENST00000478473 IGLV2-14P01704 120 aa18.14■□□□□ 0.49
C9orf3-215ENST00000478473 IDNKQ5T6J7 187 aa18.14■□□□□ 0.49
C9orf3-215ENST00000478473 TEX45Q8NA69 505 aa18.14■□□□□ 0.49
C9orf3-215ENST00000478473 TSPAN14Q8NG11 270 aa18.14■□□□□ 0.49
C9orf3-215ENST00000478473 OSR1Q8TAX0 266 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-215ENST00000478473 LGALS1P09382 135 aaKnown RBP18.13■□□□□ 0.49
C9orf3-215ENST00000478473 INSL3P51460 131 aa18.13■□□□□ 0.49
C9orf3-215ENST00000478473 RAB25P57735 213 aa18.13■□□□□ 0.49
C9orf3-215ENST00000478473 UBE2KP61086 200 aa18.13■□□□□ 0.49
C9orf3-215ENST00000478473 DGCR2P98153 550 aa18.13■□□□□ 0.49
C9orf3-215ENST00000478473 CBX3Q13185 183 aa18.13■□□□□ 0.49
C9orf3-215ENST00000478473 OVCH2Q7RTZ1 564 aa18.13■□□□□ 0.49
C9orf3-215ENST00000478473 RHOVQ96L33 236 aa18.13■□□□□ 0.49
C9orf3-215ENST00000478473 TRAV18A0A075B6X5 111 aa18.12■□□□□ 0.49
C9orf3-215ENST00000478473 SHOXO15266 292 aa18.12■□□□□ 0.49
C9orf3-215ENST00000478473 NFYAP23511 347 aaPredicted RBP18.12■□□□□ 0.49
C9orf3-215ENST00000478473 PJVKQ0ZLH3 352 aa18.12■□□□□ 0.49
C9orf3-215ENST00000478473 EIF4EBP1Q13541 118 aaPredicted RBP18.12■□□□□ 0.49
C9orf3-215ENST00000478473 HOGA1Q86XE5 327 aa18.12■□□□□ 0.49
C9orf3-215ENST00000478473 ABHD5Q8WTS1 349 aa18.12■□□□□ 0.49
C9orf3-215ENST00000478473 AUNIPQ9H7T9 357 aa18.12■□□□□ 0.49
C9orf3-215ENST00000478473 VCX3AQ9NNX9 186 aa18.12■□□□□ 0.49
C9orf3-215ENST00000478473 RBMX2Q9Y388 322 aaKnown RBP18.12■□□□□ 0.49
C9orf3-215ENST00000478473 A3GALT2U3KPV4 340 aa18.12■□□□□ 0.49
C9orf3-215ENST00000478473 IGKV1D-13A0A0B4J2D9 117 aa18.11■□□□□ 0.49
C9orf3-215ENST00000478473 SEC14L6B5MCN3 397 aa18.11■□□□□ 0.49
C9orf3-215ENST00000478473 AIREO43918 545 aa18.11■□□□□ 0.49
C9orf3-215ENST00000478473 IGKV1-13P0DP09 117 aa18.11■□□□□ 0.49
C9orf3-215ENST00000478473 DCTN2Q13561 401 aaKnown RBP18.11■□□□□ 0.49
C9orf3-215ENST00000478473 MSMO1Q15800 293 aa18.11■□□□□ 0.49
C9orf3-215ENST00000478473 DIABLOQ9NR28 239 aa18.11■□□□□ 0.49
C9orf3-215ENST00000478473 CD40LGP29965 261 aa18.1■□□□□ 0.49
C9orf3-215ENST00000478473 POC5Q8NA72 575 aa18.1■□□□□ 0.49
C9orf3-215ENST00000478473 BEST4Q8NFU0 473 aa18.1■□□□□ 0.49
C9orf3-215ENST00000478473 TNCP24821 2201 aa18.1■□□□□ 0.49
C9orf3-215ENST00000478473 XRCC3O43542 346 aa18.09■□□□□ 0.49
C9orf3-215ENST00000478473 CRYZL1O95825 349 aa18.09■□□□□ 0.49
C9orf3-215ENST00000478473 RPS19P39019 145 aaKnown RBP18.09■□□□□ 0.49
C9orf3-215ENST00000478473 VMA21Q3ZAQ7 101 aa18.09■□□□□ 0.49
C9orf3-215ENST00000478473 GRPEL2Q8TAA5 225 aa18.09■□□□□ 0.49
C9orf3-215ENST00000478473 CASTOR1Q8WTX7 329 aa18.09■□□□□ 0.49
C9orf3-215ENST00000478473 OR5B12Q96R08 314 aa18.09■□□□□ 0.49
C9orf3-215ENST00000478473 HSD17B10Q99714 261 aaKnown RBP18.09■□□□□ 0.49
C9orf3-215ENST00000478473 LINC01619G3V211 115 aa18.08■□□□□ 0.48
C9orf3-215ENST00000478473 CNIH1O95406 144 aa18.08■□□□□ 0.48
C9orf3-215ENST00000478473 TGFBR1P36897 503 aa18.08■□□□□ 0.48
C9orf3-215ENST00000478473 RPL30P62888 115 aaKnown RBP18.08■□□□□ 0.48
C9orf3-215ENST00000478473 PRSS8Q16651 343 aa18.08■□□□□ 0.48
C9orf3-215ENST00000478473 GVQW1Q8N7I0 195 aa18.08■□□□□ 0.48
C9orf3-215ENST00000478473 DCUN1D4Q92564 292 aa18.08■□□□□ 0.48
C9orf3-215ENST00000478473 ALX4Q9H161 411 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-215ENST00000478473 PRELID3BQ9Y3B1 194 aa18.08■□□□□ 0.48
C9orf3-215ENST00000478473 COL7A1Q02388 2944 aa18.07■□□□□ 0.48
C9orf3-215ENST00000478473 HSPB1P04792 205 aaKnown RBP18.07■□□□□ 0.48
C9orf3-215ENST00000478473 CBX5P45973 191 aa18.07■□□□□ 0.48
C9orf3-215ENST00000478473 TPPP2P59282 170 aa18.07■□□□□ 0.48
C9orf3-215ENST00000478473 KCTD9Q7L273 389 aa18.07■□□□□ 0.48
C9orf3-215ENST00000478473 LSM4Q9Y4Z0 139 aaKnown RBP18.07■□□□□ 0.48
C9orf3-215ENST00000478473 IGHV4OR15-8A0A075B7B6 117 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 A0A087WW49 117 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 OVOL1O14753 267 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 TRGV3P03979 118 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 AADACP22760 399 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 BRWD1-AS2P59051 145 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 CDK10Q15131 360 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 ZNF66Q6ZN08 573 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 ZNF429Q86V71 674 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 SNAPC3Q92966 411 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 DLX4Q92988 240 aaPredicted RBP18.06■□□□□ 0.48
C9orf3-215ENST00000478473 KCTD12Q96CX2 325 aaKnown RBP18.06■□□□□ 0.48
C9orf3-215ENST00000478473 S100A16Q96FQ6 103 aaKnown RBP18.06■□□□□ 0.48
C9orf3-215ENST00000478473 MS4A10Q96PG2 267 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 ANAPC10Q9UM13 185 aa18.06■□□□□ 0.48
C9orf3-215ENST00000478473 MRPS7Q9Y2R9 242 aaKnown RBP18.06■□□□□ 0.48
C9orf3-215ENST00000478473 DNAH9Q9NYC9 4486 aa18.05■□□□□ 0.48
C9orf3-215ENST00000478473 FCGR3BO75015 233 aa18.05■□□□□ 0.48
C9orf3-215ENST00000478473 DEFB121Q5J5C9 76 aa18.05■□□□□ 0.48
C9orf3-215ENST00000478473 UBE2NLQ5JXB2 153 aa18.05■□□□□ 0.48
C9orf3-215ENST00000478473 ZBTB34Q8NCN2 500 aa18.05■□□□□ 0.48
C9orf3-215ENST00000478473 SLC25A46Q96AG3 418 aa18.05■□□□□ 0.48
C9orf3-215ENST00000478473 B9D2Q9BPU9 175 aa18.05■□□□□ 0.48
C9orf3-215ENST00000478473 TINAGL1Q9GZM7 467 aaPredicted RBP18.05■□□□□ 0.48
C9orf3-215ENST00000478473 A0A0G2JLM5 398 aa18.04■□□□□ 0.48
C9orf3-215ENST00000478473 J3QRK9 145 aa18.04■□□□□ 0.48
C9orf3-215ENST00000478473 CREBL2O60519 120 aaPredicted RBP18.04■□□□□ 0.48
C9orf3-215ENST00000478473 SAA1P0DJI8 122 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms