RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 HIPK2Q9H2X6 1198 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 BARX1Q9HBU1 254 aaPredicted RBP6.54□□□□□ -1.36
VMA21-203ENST00000477649 FKBP11Q9NYL4 201 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 PSENENQ9NZ42 101 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 IGSF23A1L1A6 192 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 BTBD17A6NE02 478 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 LINC00473A8K010 186 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 DVL1O14640 695 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 SHOXO15266 292 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 KCNAB3O43448 404 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 RAMP3O60896 148 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 FCGR3BO75015 233 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 S1PR2O95136 353 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 PLAUP00749 431 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 IGHV2-70P01814 119 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 APOA2P02652 100 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 DANCRP0C864 163 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 SELLP14151 372 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 NFYBP25208 207 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 G6PCP35575 357 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 ZNF134P52741 427 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 ZNF137PP52743 207 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 RAB2AP61019 212 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 HOXA4Q00056 320 aaPredicted RBP6.53□□□□□ -1.36
VMA21-203ENST00000477649 NHLH2Q02577 135 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 ZNF816Q0VGE8 651 aaPredicted RBP6.53□□□□□ -1.36
VMA21-203ENST00000477649 LTC4SQ16873 150 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 NCR3LG1Q68D85 454 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 TMEM200BQ69YZ2 307 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 C11orf71Q6IPW1 123 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 TMEM14EPQ6UXP3 125 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 Q6ZRM9 215 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 ZNF833PQ6ZTB9 187 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 CCDC28AQ8IWP9 274 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 LYG1Q8N1E2 194 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 OR8B3Q8NGG8 313 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 OR5C1Q8NGR4 320 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 OR4A16Q8NH70 328 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 OR9G1Q8NH87 305 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 C8orf46Q8TAG6 207 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 OSR1Q8TAX0 266 aaPredicted RBP6.53□□□□□ -1.36
VMA21-203ENST00000477649 SCGB1C1Q8TD33 95 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 NEUROG1Q92886 237 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 C5orf30Q96GV9 206 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 CXorf58Q96LI9 332 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 OR8B2Q96RD0 313 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 PSMG3Q9BT73 122 aaPredicted RBP6.53□□□□□ -1.36
VMA21-203ENST00000477649 MAGT1Q9H0U3 335 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 SMDT1Q9H4I9 107 aa6.53□□□□□ -1.36
VMA21-203ENST00000477649 TLN1Q9Y490 2541 aaKnown RBP6.52□□□□□ -1.37
VMA21-203ENST00000477649 IGSF10Q6WRI0 2623 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 CADP27708 2225 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 SAA2-SAA4A0A096LPE2 208 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 PROP1O75360 226 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 RBMXL2O75526 392 aaKnown RBP6.52□□□□□ -1.37
VMA21-203ENST00000477649 TMEM50AO95807 157 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 SAA2P0DJI9 122 aaPredicted RBP6.52□□□□□ -1.37
VMA21-203ENST00000477649 GRNP28799 593 aaKnown RBP6.52□□□□□ -1.37
VMA21-203ENST00000477649 MC5RP33032 325 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 RAB13P51153 203 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 DYNLT3P51808 116 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 PRRX1P54821 245 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 BRWD1-AS2P59051 145 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 GNB2P62879 340 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 SERF2P84101 59 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 PJVKQ0ZLH3 352 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 TOR2AQ5JU69 321 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 FAM74A1Q5RGS3 127 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 PRAMEF5Q5TYX0 476 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 BTNL3Q6UXE8 466 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 ZCCHC24Q8N2G6 241 aaKnown RBP6.52□□□□□ -1.37
VMA21-203ENST00000477649 OR4A5Q8NH83 315 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 LYPD6BQ8NI32 183 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 VSTM2AQ8TAG5 236 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 DTD1Q8TEA8 209 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 H1FXQ92522 213 aaKnown RBP6.52□□□□□ -1.37
VMA21-203ENST00000477649 NEIL1Q96FI4 390 aaPredicted RBP6.52□□□□□ -1.37
VMA21-203ENST00000477649 ZNF251Q9BRH9 671 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 GGACTQ9BVM4 153 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 SMIM3Q9BZL3 60 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 RBKSQ9H477 322 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 CHODLQ9H9P2 273 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 C19orf12Q9NSK7 152 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 DCAF16Q9NXF7 216 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 NUP50Q9UKX7 468 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 PRNDQ9UKY0 176 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 ZNF257Q9Y2Q1 563 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 TIMM9Q9Y5J7 89 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 PRR14LQ5THK1 2151 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 RP1L1Q8IWN7 2480 aaPredicted RBP6.52□□□□□ -1.37
VMA21-203ENST00000477649 MGAQ8IWI9 3026 aa6.52□□□□□ -1.37
VMA21-203ENST00000477649 CEBPZOSA8MTT3 80 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 J3QR06 171 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 MPDU1O75352 247 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 TSPAN9O75954 239 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 HBE1P02100 147 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 IGHV1-8P0DP01 117 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 IGFBP2P18065 325 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 GNLYP22749 145 aa6.51□□□□□ -1.37
VMA21-203ENST00000477649 DLX6P56179 175 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms