RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 HRASP01112 189 aa15.08■□□□□ 0.01
CCM2-209ENST00000477605 FAM3BP58499 235 aaPredicted RBP15.08■□□□□ 0.01
CCM2-209ENST00000477605 COL10A1Q03692 680 aa15.08■□□□□ 0.01
CCM2-209ENST00000477605 TFF3Q07654 80 aa15.08■□□□□ 0.01
CCM2-209ENST00000477605 ZNF718Q3SXZ3 478 aa15.08■□□□□ 0.01
CCM2-209ENST00000477605 BTF3L4Q96K17 158 aa15.08■□□□□ 0.01
CCM2-209ENST00000477605 IGHV3-64DA0A0J9YX35 117 aa15.08■□□□□ 0
CCM2-209ENST00000477605 MARCH11A6NNE9 402 aa15.08■□□□□ 0
CCM2-209ENST00000477605 PPP5D1E7EU14 171 aa15.08■□□□□ 0
CCM2-209ENST00000477605 PDE6DO43924 150 aa15.08■□□□□ 0
CCM2-209ENST00000477605 RBMXL2O75526 392 aaKnown RBP15.08■□□□□ 0
CCM2-209ENST00000477605 FABP4P15090 132 aa15.08■□□□□ 0
CCM2-209ENST00000477605 GZMHP20718 246 aa15.08■□□□□ 0
CCM2-209ENST00000477605 HES3Q5TGS1 186 aa15.08■□□□□ 0
CCM2-209ENST00000477605 MBNL2Q5VZF2 373 aaKnown RBP15.08■□□□□ 0
CCM2-209ENST00000477605 OR13A1Q8NGR1 328 aa15.08■□□□□ 0
CCM2-209ENST00000477605 OR52E5Q8NH55 327 aa15.08■□□□□ 0
CCM2-209ENST00000477605 RNASEH2CQ8TDP1 164 aaKnown RBP15.08■□□□□ 0
CCM2-209ENST00000477605 ZDHHC16Q969W1 377 aa15.08■□□□□ 0
CCM2-209ENST00000477605 ACY3Q96HD9 319 aa15.08■□□□□ 0
CCM2-209ENST00000477605 TRIB1Q96RU8 372 aa15.08■□□□□ 0
CCM2-209ENST00000477605 PRDM13Q9H4Q3 707 aa15.08■□□□□ 0
CCM2-209ENST00000477605 LINC00473A8K010 186 aa15.07■□□□□ 0
CCM2-209ENST00000477605 C15orf65H3BRN8 121 aa15.07■□□□□ 0
CCM2-209ENST00000477605 HPRT1P00492 218 aa15.07■□□□□ 0
CCM2-209ENST00000477605 CD99P14209 185 aa15.07■□□□□ 0
CCM2-209ENST00000477605 CDC34P49427 236 aaPredicted RBP15.07■□□□□ 0
CCM2-209ENST00000477605 DHRS13Q6UX07 377 aa15.07■□□□□ 0
CCM2-209ENST00000477605 BTNL3Q6UXE8 466 aa15.07■□□□□ 0
CCM2-209ENST00000477605 Q6ZR03 302 aa15.07■□□□□ 0
CCM2-209ENST00000477605 FAM90A1Q86YD7 464 aa15.07■□□□□ 0
CCM2-209ENST00000477605 OR5R1Q8NH85 324 aa15.07■□□□□ 0
CCM2-209ENST00000477605 R3HDM4Q96D70 268 aa15.07■□□□□ 0
CCM2-209ENST00000477605 PACRGQ96M98 296 aaPredicted RBP15.07■□□□□ 0
CCM2-209ENST00000477605 HIST1H2BLQ99880 126 aa15.07■□□□□ 0
CCM2-209ENST00000477605 TXNDC17Q9BRA2 123 aa15.07■□□□□ 0
CCM2-209ENST00000477605 ZNF407Q9C0G0 2248 aa15.07■□□□□ 0
CCM2-209ENST00000477605 C15orf62A8K5M9 175 aa15.07■□□□□ 0
CCM2-209ENST00000477605 DVL1O14640 695 aa15.07■□□□□ 0
CCM2-209ENST00000477605 RBFOX2O43251 390 aaKnown RBP eCLIP15.07■□□□□ 01e-5■■■■□ 20.3
CCM2-209ENST00000477605 GGCTO75223 188 aaKnown RBP15.07■□□□□ 0
CCM2-209ENST00000477605 GYPAP02724 150 aa15.07■□□□□ 0
CCM2-209ENST00000477605 TYMSP04818 313 aa15.07■□□□□ 0
CCM2-209ENST00000477605 GCH1P30793 250 aa15.07■□□□□ 0
CCM2-209ENST00000477605 Q3ZCU0 254 aa15.07■□□□□ 0
CCM2-209ENST00000477605 C4orf17Q53FE4 359 aa15.07■□□□□ 0
CCM2-209ENST00000477605 PDLIM3Q53GG5 364 aaPredicted RBP15.07■□□□□ 0
CCM2-209ENST00000477605 CXorf67Q86X51 503 aaPredicted RBP15.07■□□□□ 0
CCM2-209ENST00000477605 GCNT2Q8N0V5 402 aa15.07■□□□□ 0
CCM2-209ENST00000477605 PSG11Q9UQ72 335 aa15.07■□□□□ 0
CCM2-209ENST00000477605 TPRP12270 2363 aaKnown RBP15.07■□□□□ 0
CCM2-209ENST00000477605 SPAARA0A1B0GVQ0 90 aa15.06■□□□□ 0
CCM2-209ENST00000477605 PAGE4O60829 102 aa15.06■□□□□ 0
CCM2-209ENST00000477605 CD82P27701 267 aa15.06■□□□□ 0
CCM2-209ENST00000477605 CD1BP29016 333 aa15.06■□□□□ 0
CCM2-209ENST00000477605 SPCS3P61009 180 aa15.06■□□□□ 0
CCM2-209ENST00000477605 FOXF2Q12947 444 aa15.06■□□□□ 0
CCM2-209ENST00000477605 CR1LQ2VPA4 569 aa15.06■□□□□ 0
CCM2-209ENST00000477605 PRAMEF6Q5VXH4 476 aa15.06■□□□□ 0
CCM2-209ENST00000477605 SNX22Q96L94 193 aa15.06■□□□□ 0
CCM2-209ENST00000477605 JPT1Q9UK76 154 aa15.06■□□□□ 0
CCM2-209ENST00000477605 AQP7O14520 342 aa15.05■□□□□ 0
CCM2-209ENST00000477605 HMGB3O15347 200 aaKnown RBP15.05■□□□□ 0
CCM2-209ENST00000477605 IGLV1-44P01699 117 aa15.05■□□□□ 0
CCM2-209ENST00000477605 DUTP33316 252 aaKnown RBP15.05■□□□□ 0
CCM2-209ENST00000477605 SSTR5P35346 364 aa15.05■□□□□ 0
CCM2-209ENST00000477605 KIR2DL2P43627 348 aaPredicted RBP15.05■□□□□ 0
CCM2-209ENST00000477605 DEFA6Q01524 100 aa15.05■□□□□ 0
CCM2-209ENST00000477605 PDZD11Q5EBL8 140 aa15.05■□□□□ 0
CCM2-209ENST00000477605 CISD2Q8N5K1 135 aaKnown RBP15.05■□□□□ 0
CCM2-209ENST00000477605 FAM169BQ8N8A8 192 aa15.05■□□□□ 0
CCM2-209ENST00000477605 PPP1R35Q8TAP8 253 aa15.05■□□□□ 0
CCM2-209ENST00000477605 OR6C3Q9NZP0 311 aa15.05■□□□□ 0
CCM2-209ENST00000477605 GAB2Q9UQC2 676 aa15.05■□□□□ 0
CCM2-209ENST00000477605 TRBV23-1A0A0A0MS06 115 aa15.05■□□□□ -0
CCM2-209ENST00000477605 C11orf94C9JXX5 98 aa15.05■□□□□ -0
CCM2-209ENST00000477605 F6UZH7 168 aa15.05■□□□□ -0
CCM2-209ENST00000477605 TMPRSS2O15393 492 aa15.05■□□□□ -0
CCM2-209ENST00000477605 IFNA10P01566 189 aa15.05■□□□□ -0
CCM2-209ENST00000477605 PRDX2P32119 198 aa15.05■□□□□ -0
CCM2-209ENST00000477605 GPR12P47775 334 aa15.05■□□□□ -0
CCM2-209ENST00000477605 TMPRSS3P57727 454 aa15.05■□□□□ -0
CCM2-209ENST00000477605 PKIAP61925 76 aa15.05■□□□□ -0
CCM2-209ENST00000477605 LCN2P80188 198 aa15.05■□□□□ -0
CCM2-209ENST00000477605 FAM53AQ6NSI3 398 aaPredicted RBP15.05■□□□□ -0
CCM2-209ENST00000477605 KCNIP4Q6PIL6 250 aa15.05■□□□□ -0
CCM2-209ENST00000477605 OR2T10Q8NGZ9 312 aa15.05■□□□□ -0
CCM2-209ENST00000477605 OR1P1Q8NH06 330 aa15.05■□□□□ -0
CCM2-209ENST00000477605 TMEM170AQ8WVE7 144 aa15.05■□□□□ -0
CCM2-209ENST00000477605 IMMP2LQ96T52 175 aa15.05■□□□□ -0
CCM2-209ENST00000477605 ST8SIA5O15466 376 aa15.04■□□□□ -0
CCM2-209ENST00000477605 YPEL1O60688 119 aa15.04■□□□□ -0
CCM2-209ENST00000477605 KIR2DS2P43631 304 aa15.04■□□□□ -0
CCM2-209ENST00000477605 PDLIM4P50479 330 aa15.04■□□□□ -0
CCM2-209ENST00000477605 ESPL1Q14674 2120 aa15.04■□□□□ -0
CCM2-209ENST00000477605 ATP1A1-AS1Q5TC04 95 aa15.04■□□□□ -0
CCM2-209ENST00000477605 MED12LQ86YW9 2145 aa15.04■□□□□ -0
CCM2-209ENST00000477605 Q8N7P7 452 aa15.04■□□□□ -0
CCM2-209ENST00000477605 YPEL2Q96QA6 119 aa15.04■□□□□ -0
CCM2-209ENST00000477605 QTRT1Q9BXR0 403 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms