RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 RAB9AP51151 201 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 ATP5IP56385 69 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-212ENST00000477520 TMEM50BP56557 158 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 OR1D5P58170 312 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 RPL27P61353 136 aaKnown RBP3.97□□□□□ -1.77
PTCD3-212ENST00000477520 HERV-K104P61576 105 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 RPS15AP62244 130 aaKnown RBP3.97□□□□□ -1.77
PTCD3-212ENST00000477520 RPS21P63220 83 aaKnown RBP3.97□□□□□ -1.77
PTCD3-212ENST00000477520 MRPS34P82930 218 aaKnown RBP3.97□□□□□ -1.77
PTCD3-212ENST00000477520 RPL24P83731 157 aaKnown RBP3.97□□□□□ -1.77
PTCD3-212ENST00000477520 PSG9Q00887 426 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 ZNF90Q03938 601 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 NFATC4Q14934 902 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 POM121L1PQ3SYA9 428 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 FFAR4Q5NUL3 377 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 PHYHD1Q5SRE7 291 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 ZNF324BQ6AW86 544 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-212ENST00000477520 ZNF793Q6ZN11 406 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 FOXI2Q6ZQN5 318 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 Q6ZS49 121 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 DOK3Q7L591 496 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 LYZL2Q7Z4W2 148 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 NECAP1Q8NC96 275 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 OR51T1Q8NGJ9 327 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 OR1B1Q8NGR6 318 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 OR2K2Q8NGT1 345 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 TMEM171Q8WVE6 324 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 SPSB4Q96A44 273 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 CHRDL1Q9BU40 450 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 SFXN3Q9BWM7 321 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 PECRQ9BY49 303 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 KRTAP1-5Q9BYS1 174 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 LINC00470Q9BZP3 86 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 COMMD5Q9GZQ3 224 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 TMEM191AQ9H0A3 160 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 TXNIPQ9H3M7 391 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 ZNF665Q9H7R5 613 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 METTL7AQ9H8H3 244 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 MRPL16Q9NX20 251 aaKnown RBP3.97□□□□□ -1.77
PTCD3-212ENST00000477520 SPANXCQ9NY87 97 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 SIGLEC8Q9NYZ4 499 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 IL36GQ9NZH8 169 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 MUC6Q6W4X9 2439 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 PIKFYVEQ9Y2I7 2098 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 PLXND1Q9Y4D7 1925 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 SCN2AQ99250 2005 aa3.97□□□□□ -1.77
PTCD3-212ENST00000477520 DOCK9Q9BZ29 2069 aa3.96□□□□□ -1.77
PTCD3-212ENST00000477520 CEP192Q8TEP8 1941 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 RALGAPA1Q6GYQ0 2036 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 PPIAL4EA0A075B759 164 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 IGLV1-36A0A0B4J1U3 117 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 PPIAL4CA0A0B4J2A2 164 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 IGHV1OR15-9A0A0B4J2B8 117 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 A0A1W2PR80 420 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM202A6NGA9 273 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 DNAJC9-AS1A6NH13 148 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 ANKRD30BLA7E2S9 258 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 ZNF850A8MQ14 1090 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 B4DGG1 531 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 C9JCJ5 164 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 PPIAL4DF5H284 164 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 F8W1H4 67 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 K7EQM0 130 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 K7ESF4 209 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 FCN1O00602 326 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 SOCS1O15524 211 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 PHF1O43189 567 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 HOXA3O43365 443 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 XRCC2O43543 280 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 NUPR1O60356 82 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 GPR75O95800 540 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 BGLAPP02818 100 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 CLEC3BP05452 202 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 CD55P08174 381 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 OR9G9P0C7N8 305 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 SP9P0CG40 484 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 CT45A6P0DMU7 189 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 CT45A5P0DMU8 189 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 CT45A7P0DMV0 189 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 PPIAL4FP0DN26 164 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 CCL2P13500 99 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 AZU1P20160 251 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 MDKP21741 143 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 BLVRBP30043 206 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 DRD3P35462 400 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 CA7P43166 264 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 TCL1AP56279 114 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 RIPPLY3P57055 190 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 ARF3P61204 181 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 RPL18Q07020 188 aaKnown RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 KLF5Q13887 457 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 SGCBQ16585 318 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.96□□□□□ -1.78
PTCD3-212ENST00000477520 RPEL1Q2QD12 228 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM52BQ4KMG9 183 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 CT45A1Q5HYN5 189 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM211Q6ICI0 200 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 SLC25A47Q6Q0C1 308 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 LCN15Q6UWW0 184 aa3.96□□□□□ -1.78
PTCD3-212ENST00000477520 TMEM108Q6UXF1 575 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms