RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 C1orf229Q6ZS94 237 aaPredicted RBP13.8□□□□□ -0.2
TVP23B-202ENST00000476139 Q8NA96 180 aa13.8□□□□□ -0.2
TVP23B-202ENST00000476139 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.8□□□□□ -0.2
TVP23B-202ENST00000476139 BTBD17A6NE02 478 aa13.8□□□□□ -0.2
TVP23B-202ENST00000476139 IGHV1-46P01743 117 aa13.8□□□□□ -0.2
TVP23B-202ENST00000476139 RAB2AP61019 212 aa13.8□□□□□ -0.2
TVP23B-202ENST00000476139 PAX5Q02548 391 aa13.8□□□□□ -0.2
TVP23B-202ENST00000476139 H2BFWTQ7Z2G1 175 aa13.8□□□□□ -0.2
TVP23B-202ENST00000476139 VKORC1L1Q8N0U8 176 aa13.8□□□□□ -0.2
TVP23B-202ENST00000476139 MARCH11A6NNE9 402 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 S100A9P06702 114 aaKnown RBP13.79□□□□□ -0.2
TVP23B-202ENST00000476139 DEFA4P12838 97 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 GPR12P47775 334 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 HBG1P69891 147 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 HBG2P69892 147 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 KIAA0141Q14154 515 aaPredicted RBP13.79□□□□□ -0.2
TVP23B-202ENST00000476139 LRRC75BQ2VPJ9 315 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 SSX9Q7RTT3 188 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 KDF1Q8NAX2 398 aaPredicted RBP13.79□□□□□ -0.2
TVP23B-202ENST00000476139 TVP23CQ96ET8 276 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 RCC1LQ96I51 464 aaKnown RBP13.79□□□□□ -0.2
TVP23B-202ENST00000476139 FCGR3BO75015 233 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 CLDN14O95500 239 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 HSPB1P04792 205 aaKnown RBP13.79□□□□□ -0.2
TVP23B-202ENST00000476139 DUTP33316 252 aaKnown RBP13.79□□□□□ -0.2
TVP23B-202ENST00000476139 TDGF1P3P51864 188 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 TNFAIP6P98066 277 aaPredicted RBP13.79□□□□□ -0.2
TVP23B-202ENST00000476139 MSMO1Q15800 293 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 FAM90A1Q86YD7 464 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 HSD17B10Q99714 261 aaKnown RBP13.79□□□□□ -0.2
TVP23B-202ENST00000476139 TMPRSS5Q9H3S3 457 aa13.79□□□□□ -0.2
TVP23B-202ENST00000476139 LOC102723971A0A1B0GUV8 181 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 CEBPZOSA8MTT3 80 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 FAM90A26D6RGX4 464 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 SLC31A2O15432 143 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 HBE1P02100 147 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 NDUFA6P56556 154 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 ELOBQ15370 118 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 PRR30Q53SZ7 412 aaPredicted RBP13.78□□□□□ -0.2
TVP23B-202ENST00000476139 TMEM14EPQ6UXP3 125 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 YPEL4Q96NS1 127 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 UNKLQ9H9P5 680 aaKnown RBP13.78□□□□□ -0.2
TVP23B-202ENST00000476139 PRRG2O14669 202 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 CLN5O75503 358 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 IGHV2-5P01817 119 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 MDKP21741 143 aaPredicted RBP13.78□□□□□ -0.2
TVP23B-202ENST00000476139 CCL8P80075 99 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 SLC38A11Q08AI6 406 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 ZNF66Q6ZN08 573 aa13.78□□□□□ -0.2
TVP23B-202ENST00000476139 SNRNP40Q96DI7 357 aaKnown RBP13.78□□□□□ -0.2
TVP23B-202ENST00000476139 WDR61Q9GZS3 305 aaKnown RBP13.78□□□□□ -0.2
TVP23B-202ENST00000476139 CUL9Q8IWT3 2517 aa13.77□□□□□ -0.2
TVP23B-202ENST00000476139 CYB5BO43169 146 aa13.77□□□□□ -0.2
TVP23B-202ENST00000476139 IFNA17P01571 189 aa13.77□□□□□ -0.2
TVP23B-202ENST00000476139 IGKV1D-33P01593 117 aa13.77□□□□□ -0.2
TVP23B-202ENST00000476139 IGKV1-33P01594 117 aa13.77□□□□□ -0.2
TVP23B-202ENST00000476139 WFDC8Q8IUA0 241 aa13.77□□□□□ -0.2
TVP23B-202ENST00000476139 SMDT1Q9H4I9 107 aa13.77□□□□□ -0.2
TVP23B-202ENST00000476139 TLN1Q9Y490 2541 aaKnown RBP13.77□□□□□ -0.2
TVP23B-202ENST00000476139 AP4M1O00189 453 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 CR1LQ2VPA4 569 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 C3orf36Q3SXR2 165 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 PDZD11Q5EBL8 140 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 TRAT1Q6PIZ9 186 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 SPACA3Q8IXA5 215 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 PPP1R35Q8TAP8 253 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 DTD1Q8TEA8 209 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 EDARADDQ8WWZ3 215 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 M0R1X1 148 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 OR9G9P0C7N8 305 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 SELENOVP59797 346 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 KHDC3LQ587J8 217 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 CCL13Q99616 98 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 SCNM1Q9BWG6 230 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 QTRT1Q9BXR0 403 aaKnown RBP13.77□□□□□ -0.21
TVP23B-202ENST00000476139 CALYQ9NYX4 217 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 RNF7Q9UBF6 113 aa13.77□□□□□ -0.21
TVP23B-202ENST00000476139 PPIHO43447 177 aaKnown RBP13.76□□□□□ -0.21
TVP23B-202ENST00000476139 YPEL1O60688 119 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 GYPAP02724 150 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 RD3LP0DJH9 198 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 C17orf58Q2M2W7 97 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 FAM90A2PQ658T7 463 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 Q8TCH9 128 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 R3HDM4Q96D70 268 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 YPEL2Q96QA6 119 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 SSX3Q99909 188 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 METTL1Q9UBP6 276 aaKnown RBP13.76□□□□□ -0.21
TVP23B-202ENST00000476139 IL19Q9UHD0 177 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 JPT1Q9UK76 154 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 C16orf97H3BN30 126 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 RAB29O14966 203 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 BCL2P10415 239 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 GATA4P43694 442 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 C4orf17Q53FE4 359 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 GFRALQ6UXV0 394 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 TAF15Q92804 592 aaKnown RBP eCLIP13.76□□□□□ -0.21
TVP23B-202ENST00000476139 IFI27L2Q9H2X8 130 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 PKDREJQ9NTG1 2253 aa13.76□□□□□ -0.21
TVP23B-202ENST00000476139 DPRXA6NFQ7 191 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms