RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 SLC35E3Q7Z769 313 aa10.88□□□□□ -0.67
ATG9A-220ENST00000475339 FOXRED2Q8IWF2 684 aa10.88□□□□□ -0.67
ATG9A-220ENST00000475339 H1FOOQ8IZA3 346 aaPredicted RBP10.88□□□□□ -0.67
ATG9A-220ENST00000475339 BEST4Q8NFU0 473 aa10.88□□□□□ -0.67
ATG9A-220ENST00000475339 CMTM3Q96MX0 182 aa10.88□□□□□ -0.67
ATG9A-220ENST00000475339 BCL7BQ9BQE9 202 aa10.88□□□□□ -0.67
ATG9A-220ENST00000475339 LIN7CQ9NUP9 197 aaKnown RBP10.88□□□□□ -0.67
ATG9A-220ENST00000475339 KIAA1456Q9P272 454 aa10.88□□□□□ -0.67
ATG9A-220ENST00000475339 WASHC3Q9Y3C0 194 aa10.88□□□□□ -0.67
ATG9A-220ENST00000475339 MEIS3P1A6NDR6 274 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 FAM25AB3EWG3 89 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 FAM25CB3EWG5 89 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 FAM25GB3EWG6 89 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 HPGDSO60760 199 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 EIF4EP06730 217 aaKnown RBP10.87□□□□□ -0.67
ATG9A-220ENST00000475339 FCER2P06734 321 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 CT45A6P0DMU7 189 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 CT45A5P0DMU8 189 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 CT45A7P0DMV0 189 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 PTHLHP12272 177 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 NFYAP23511 347 aaPredicted RBP10.87□□□□□ -0.67
ATG9A-220ENST00000475339 TMBIM6P55061 237 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 CBX3Q13185 183 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 FHL3Q13643 280 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 ZNF429Q86V71 674 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 HOGA1Q86XE5 327 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 GVQW1Q8N7I0 195 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 Q8N9W7 124 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 DRAXINQ8NBI3 349 aaPredicted RBP10.87□□□□□ -0.67
ATG9A-220ENST00000475339 C19orf73Q9NVV2 129 aa10.87□□□□□ -0.67
ATG9A-220ENST00000475339 MRPS7Q9Y2R9 242 aaKnown RBP10.87□□□□□ -0.67
ATG9A-220ENST00000475339 H0YJW9 148 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 J3QRK9 145 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 NBR2O15453 112 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 RBBP9O75884 186 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 PRSS3P35030 304 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 CDX1P47902 265 aaPredicted RBP10.86□□□□□ -0.67
ATG9A-220ENST00000475339 F2RL1P55085 397 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 SPCS2Q15005 226 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 PLGLAQ15195 96 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 TEX38Q6PEX7 206 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 SDHAF2Q9NX18 166 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 OR2W1Q9Y3N9 320 aa10.86□□□□□ -0.67
ATG9A-220ENST00000475339 CCDC160A6NGH7 325 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 ELK1P19419 428 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 HAGHQ16775 308 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 PDPNQ86YL7 162 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 SNX29P2Q8IUI4 249 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 STPG2Q8N412 459 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 FAM71E2Q8N5Q1 922 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 ZNF383Q8NA42 475 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 OR11H1Q8NG94 326 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 OR5AN1Q8NGI8 311 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 PLSCR3Q9NRY6 295 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 SLC35D1Q9NTN3 355 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 ZNF107Q9UII5 783 aaPredicted RBP10.85□□□□□ -0.67
ATG9A-220ENST00000475339 ADAM30Q9UKF2 790 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 GAB2Q9UQC2 676 aa10.85□□□□□ -0.67
ATG9A-220ENST00000475339 AP4M1O00189 453 aa10.84□□□□□ -0.67
ATG9A-220ENST00000475339 RGS5O15539 181 aa10.84□□□□□ -0.67
ATG9A-220ENST00000475339 SLC22A5O76082 557 aa10.84□□□□□ -0.67
ATG9A-220ENST00000475339 IGHG2P01859 326 aa10.84□□□□□ -0.67
ATG9A-220ENST00000475339 CNTFRP26992 372 aa10.84□□□□□ -0.67
ATG9A-220ENST00000475339 RTL8BQ17RB0 113 aa10.84□□□□□ -0.67
ATG9A-220ENST00000475339 CXorf66Q5JRM2 361 aaPredicted RBP10.84□□□□□ -0.67
ATG9A-220ENST00000475339 Q8N1Y9 231 aa10.84□□□□□ -0.67
ATG9A-220ENST00000475339 ZNF645Q8N7E2 425 aa10.84□□□□□ -0.67
ATG9A-220ENST00000475339 FLYWCH2Q96CP2 140 aaKnown RBP10.84□□□□□ -0.67
ATG9A-220ENST00000475339 ADTRPQ96IZ2 230 aa10.84□□□□□ -0.67
ATG9A-220ENST00000475339 TSNAXQ99598 290 aaKnown RBP10.84□□□□□ -0.67
ATG9A-220ENST00000475339 EXTL2Q9UBQ6 330 aa10.84□□□□□ -0.67
ATG9A-220ENST00000475339 LINC01548A6NM66 108 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 SAP30O75446 220 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 TUSC2O75896 110 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 OR5H8P0DN80 308 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 FCGR2CP31995 323 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 TAS2R46P59540 309 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 RPS16P62249 146 aaKnown RBP10.83□□□□□ -0.68
ATG9A-220ENST00000475339 TAGLNQ01995 201 aaKnown RBP10.83□□□□□ -0.68
ATG9A-220ENST00000475339 CDK10Q15131 360 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 C5orf64Q2M2E5 130 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 ASPHD1Q5U4P2 390 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 NPBQ8NG41 125 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 OR5AP2Q8NGF4 316 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 C4orf3Q8WVX3 66 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 SNAPC3Q92966 411 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 RITA1Q96K30 269 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 RNF5Q99942 180 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 GON7Q9BXV9 100 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 KRTAP4-5Q9BYR2 181 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 SCPEP1Q9HB40 452 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 RETNQ9HD89 108 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 EHFQ9NZC4 300 aa10.83□□□□□ -0.68
ATG9A-220ENST00000475339 CCDC59Q9P031 241 aaKnown RBP10.83□□□□□ -0.68
ATG9A-220ENST00000475339 A8MZ25 164 aa10.82□□□□□ -0.68
ATG9A-220ENST00000475339 H3BMQ9 156 aa10.82□□□□□ -0.68
ATG9A-220ENST00000475339 RRHO14718 337 aa10.82□□□□□ -0.68
ATG9A-220ENST00000475339 PROP1O75360 226 aa10.82□□□□□ -0.68
ATG9A-220ENST00000475339 DEDDO75618 318 aa10.82□□□□□ -0.68
ATG9A-220ENST00000475339 SPDEFO95238 335 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms