RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 OR5T1Q8NG75 326 aa14.28□□□□□ -0.12
COL7A1-209ENST00000474432 HARBI1Q96MB7 349 aa14.28□□□□□ -0.12
COL7A1-209ENST00000474432 GINS4Q9BRT9 223 aa14.28□□□□□ -0.12
COL7A1-209ENST00000474432 SLA2Q9H6Q3 261 aa14.28□□□□□ -0.12
COL7A1-209ENST00000474432 RNF167Q9H6Y7 350 aa14.28□□□□□ -0.12
COL7A1-209ENST00000474432 IGLV2-14P01704 120 aa14.27□□□□□ -0.13
COL7A1-209ENST00000474432 TRGV3P03979 118 aa14.27□□□□□ -0.13
COL7A1-209ENST00000474432 TALDO1P37837 337 aa14.27□□□□□ -0.13
COL7A1-209ENST00000474432 TAGLNQ01995 201 aaKnown RBP14.27□□□□□ -0.13
COL7A1-209ENST00000474432 ZNF773Q6PK81 442 aa14.27□□□□□ -0.13
COL7A1-209ENST00000474432 POC5Q8NA72 575 aa14.27□□□□□ -0.13
COL7A1-209ENST00000474432 NUDCD2Q8WVJ2 157 aa14.27□□□□□ -0.13
COL7A1-209ENST00000474432 DAPK2Q9UIK4 370 aa14.27□□□□□ -0.13
COL7A1-209ENST00000474432 HUWE1Q7Z6Z7 4374 aaKnown RBP14.27□□□□□ -0.13
COL7A1-209ENST00000474432 TMEM235A6NFC5 223 aa14.26□□□□□ -0.13
COL7A1-209ENST00000474432 SHOXO15266 292 aa14.26□□□□□ -0.13
COL7A1-209ENST00000474432 RBMXL2O75526 392 aaKnown RBP14.26□□□□□ -0.13
COL7A1-209ENST00000474432 BRI3O95415 125 aa14.26□□□□□ -0.13
COL7A1-209ENST00000474432 SDC2P34741 201 aa14.26□□□□□ -0.13
COL7A1-209ENST00000474432 ARL6IP1Q15041 203 aa14.26□□□□□ -0.13
COL7A1-209ENST00000474432 SFXN4Q6P4A7 337 aa14.26□□□□□ -0.13
COL7A1-209ENST00000474432 LGALS14Q8TCE9 139 aa14.26□□□□□ -0.13
COL7A1-209ENST00000474432 ST6GALNAC5Q9BVH7 336 aa14.26□□□□□ -0.13
COL7A1-209ENST00000474432 DCSTAMPQ9H295 470 aa14.26□□□□□ -0.13
COL7A1-209ENST00000474432 SSR3Q9UNL2 185 aa14.26□□□□□ -0.13
COL7A1-209ENST00000474432 RRP15Q9Y3B9 282 aaKnown RBP14.26□□□□□ -0.13
COL7A1-209ENST00000474432 IGKV1D-13A0A0B4J2D9 117 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 H3BUA1 57 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 SAP30O75446 220 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 CNIH1O95406 144 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 HLA-DQB1P01920 261 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 NHLRC4P0CG21 123 aaPredicted RBP14.25□□□□□ -0.13
COL7A1-209ENST00000474432 IGKV1-13P0DP09 117 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 SPNP16150 400 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 NFYAP23511 347 aaPredicted RBP14.25□□□□□ -0.13
COL7A1-209ENST00000474432 UBE2KP61086 200 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 RPL30P62888 115 aaKnown RBP14.25□□□□□ -0.13
COL7A1-209ENST00000474432 RTL8BQ17RB0 113 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 OR5H6Q8NGV6 325 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 SLC25A38Q96DW6 304 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 ADTRPQ96IZ2 230 aa14.25□□□□□ -0.13
COL7A1-209ENST00000474432 RBM7Q9Y580 266 aaKnown RBP14.25□□□□□ -0.13
COL7A1-209ENST00000474432 J3QRK9 145 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 CRYZL1O95825 349 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 RRASP10301 218 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 DEFA5Q01523 94 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 EIF4EBP1Q13541 118 aaPredicted RBP14.24□□□□□ -0.13
COL7A1-209ENST00000474432 PRSS8Q16651 343 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 IDO2Q6ZQW0 420 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 TEX45Q8NA69 505 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 WWC2-AS2Q96NR7 200 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 ASCL2Q99929 193 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 CENPOQ9BU64 300 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 Q9H521 79 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 OR2W1Q9Y3N9 320 aa14.24□□□□□ -0.13
COL7A1-209ENST00000474432 TUSC2O75896 110 aa14.23□□□□□ -0.13
COL7A1-209ENST00000474432 CD40LGP29965 261 aa14.23□□□□□ -0.13
COL7A1-209ENST00000474432 BRWD1-AS2P59051 145 aa14.23□□□□□ -0.13
COL7A1-209ENST00000474432 MXD1Q05195 221 aa14.23□□□□□ -0.13
COL7A1-209ENST00000474432 CNIH2Q6PI25 160 aa14.23□□□□□ -0.13
COL7A1-209ENST00000474432 ZNF645Q8N7E2 425 aa14.23□□□□□ -0.13
COL7A1-209ENST00000474432 TMEM68Q96MH6 324 aa14.23□□□□□ -0.13
COL7A1-209ENST00000474432 TINAGL1Q9GZM7 467 aaPredicted RBP14.23□□□□□ -0.13
COL7A1-209ENST00000474432 ZNF355PQ9NSJ1 428 aa14.23□□□□□ -0.13
COL7A1-209ENST00000474432 RHBDL2Q9NX52 303 aa14.23□□□□□ -0.13
COL7A1-209ENST00000474432 RBMX2Q9Y388 322 aaKnown RBP14.23□□□□□ -0.13
COL7A1-209ENST00000474432 MSGN1A6NI15 193 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 LY86O95711 162 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 CTXN2P0C2S0 81 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 APELAP0DMC3 54 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 PITPNAQ00169 270 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 DYRK1AQ13627 763 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 IL34Q6ZMJ4 242 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 HAPLN4Q86UW8 402 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 ADAD2Q8NCV1 583 aaKnown RBP14.22□□□□□ -0.13
COL7A1-209ENST00000474432 OSR1Q8TAX0 266 aaPredicted RBP14.22□□□□□ -0.13
COL7A1-209ENST00000474432 ANXA10Q9UJ72 324 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 SMAD5-AS1Q9Y6J3 95 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 U3KQK5 164 aa14.22□□□□□ -0.13
COL7A1-209ENST00000474432 ANKRD34BA5PLL1 514 aa14.21□□□□□ -0.13
COL7A1-209ENST00000474432 TRBV12-3P01733 135 aa14.21□□□□□ -0.13
COL7A1-209ENST00000474432 SAA1P0DJI8 122 aaPredicted RBP14.21□□□□□ -0.13
COL7A1-209ENST00000474432 GP9P14770 177 aa14.21□□□□□ -0.13
COL7A1-209ENST00000474432 CBX3Q13185 183 aa14.21□□□□□ -0.13
COL7A1-209ENST00000474432 KLF5Q13887 457 aaPredicted RBP14.21□□□□□ -0.13
COL7A1-209ENST00000474432 VMA21Q3ZAQ7 101 aa14.21□□□□□ -0.13
COL7A1-209ENST00000474432 ZNF343Q6P1L6 599 aa14.21□□□□□ -0.13
COL7A1-209ENST00000474432 OVCH2Q7RTZ1 564 aa14.21□□□□□ -0.13
COL7A1-209ENST00000474432 ZNF430Q9H8G1 570 aaPredicted RBP14.21□□□□□ -0.13
COL7A1-209ENST00000474432 RANGRFQ9HD47 186 aaPredicted RBP14.21□□□□□ -0.13
COL7A1-209ENST00000474432 A0A0G2JLM5 398 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 C13orf42A0A1B0GVH6 325 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 TRIM64CA6NLI5 447 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 FCGR3BO75015 233 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 SCGNO76038 276 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 IGLV1-51P01701 117 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 CD36P16671 472 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 SCAND1P57086 179 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 GNG2P59768 71 aa14.2□□□□□ -0.14
COL7A1-209ENST00000474432 TNXAQ16473 311 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms