RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 HLA-DQB1P01920 261 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 IGKV1-13P0DP09 117 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 PTHLHP12272 177 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 LGALS7P47929 136 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 LUMP51884 338 aaPredicted RBP13.92□□□□□ -0.18
UPF3A-203ENST00000474056 RUNX1Q01196 453 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 TAGLNQ01995 201 aaKnown RBP13.92□□□□□ -0.18
UPF3A-203ENST00000474056 PJVKQ0ZLH3 352 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 CBX3Q13185 183 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 FXYD3Q14802 87 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 RTL8BQ17RB0 113 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 AKIRIN2Q53H80 203 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 ACTBL2Q562R1 376 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 GVQW1Q8N7I0 195 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 GRPEL2Q8TAA5 225 aa13.92□□□□□ -0.18
UPF3A-203ENST00000474056 ALX4Q9H161 411 aaPredicted RBP13.92□□□□□ -0.18
UPF3A-203ENST00000474056 A0A0A6YYH2 397 aa13.91□□□□□ -0.18
UPF3A-203ENST00000474056 A6NJ64 397 aa13.91□□□□□ -0.18
UPF3A-203ENST00000474056 CRYZL1O95825 349 aa13.91□□□□□ -0.18
UPF3A-203ENST00000474056 RRASP10301 218 aa13.91□□□□□ -0.18
UPF3A-203ENST00000474056 RPS19P39019 145 aaKnown RBP13.91□□□□□ -0.18
UPF3A-203ENST00000474056 ADTRPQ96IZ2 230 aa13.91□□□□□ -0.18
UPF3A-203ENST00000474056 SORL1Q92673 2214 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 TRIM64CA6NLI5 447 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 TMEM127O75204 238 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 IGLV2-14P01704 120 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 ZNF616Q08AN1 781 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 MRGPRG-AS1Q2M3A8 158 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 PYHIN1Q6K0P9 492 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 BEST4Q8NFU0 473 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 OR1N2Q8NGR9 330 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 MS4A10Q96PG2 267 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 AUNIPQ9H7T9 357 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 DIABLOQ9NR28 239 aa13.9□□□□□ -0.18
UPF3A-203ENST00000474056 RBMX2Q9Y388 322 aaKnown RBP13.9□□□□□ -0.18
UPF3A-203ENST00000474056 DNAH9Q9NYC9 4486 aa13.89□□□□□ -0.19
UPF3A-203ENST00000474056 TUSC2O75896 110 aa13.89□□□□□ -0.19
UPF3A-203ENST00000474056 CNIH1O95406 144 aa13.89□□□□□ -0.19
UPF3A-203ENST00000474056 FCER2P06734 321 aa13.89□□□□□ -0.19
UPF3A-203ENST00000474056 OR8U8P0C7N1 319 aa13.89□□□□□ -0.19
UPF3A-203ENST00000474056 RPL30P62888 115 aaKnown RBP13.89□□□□□ -0.19
UPF3A-203ENST00000474056 C9orf66Q5T8R8 295 aa13.89□□□□□ -0.19
UPF3A-203ENST00000474056 HOGA1Q86XE5 327 aa13.89□□□□□ -0.19
UPF3A-203ENST00000474056 CROCCP3Q8IVE0 287 aa13.89□□□□□ -0.19
UPF3A-203ENST00000474056 SEC14L6B5MCN3 397 aa13.88□□□□□ -0.19
UPF3A-203ENST00000474056 FCGR3BO75015 233 aa13.88□□□□□ -0.19
UPF3A-203ENST00000474056 IGHV3-11P01762 117 aa13.88□□□□□ -0.19
UPF3A-203ENST00000474056 LGALS1P09382 135 aaKnown RBP13.88□□□□□ -0.19
UPF3A-203ENST00000474056 TPPP2P59282 170 aa13.88□□□□□ -0.19
UPF3A-203ENST00000474056 ARPC4P59998 168 aa13.88□□□□□ -0.19
UPF3A-203ENST00000474056 VMA21Q3ZAQ7 101 aa13.88□□□□□ -0.19
UPF3A-203ENST00000474056 OR2B11Q5JQS5 317 aa13.88□□□□□ -0.19
UPF3A-203ENST00000474056 IDO2Q6ZQW0 420 aa13.88□□□□□ -0.19
UPF3A-203ENST00000474056 KCTD9Q7L273 389 aa13.88□□□□□ -0.19
UPF3A-203ENST00000474056 MEIS3P1A6NDR6 274 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 SLC22A5O76082 557 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 SLURP1P55000 103 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 UBE2KP61086 200 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 EIF4EBP1Q13541 118 aaPredicted RBP13.87□□□□□ -0.19
UPF3A-203ENST00000474056 UBE2NLQ5JXB2 153 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 TEX45Q8NA69 505 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 POC5Q8NA72 575 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 OR5T1Q8NG75 326 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 OSR1Q8TAX0 266 aaPredicted RBP13.87□□□□□ -0.19
UPF3A-203ENST00000474056 SNAPC3Q92966 411 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 FUNDC2Q9BWH2 189 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 SLA2Q9H6Q3 261 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 ZNF355PQ9NSJ1 428 aa13.87□□□□□ -0.19
UPF3A-203ENST00000474056 IGHV4OR15-8A0A075B7B6 117 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 A0A087WW49 117 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 LINC01619G3V211 115 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 XRCC3O43542 346 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 TRGV3P03979 118 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 SAA1P0DJI8 122 aaPredicted RBP13.86□□□□□ -0.19
UPF3A-203ENST00000474056 AADACP22760 399 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 FCGR2CP31995 323 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 NCS1P62166 190 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 DGCR2P98153 550 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 TNXAQ16473 311 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 DEFB121Q5J5C9 76 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 OVCH2Q7RTZ1 564 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 SAMD12Q8N8I0 201 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 DCUN1D4Q92564 292 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 RHOVQ96L33 236 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 SCOCQ9UIL1 159 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 PRELID3BQ9Y3B1 194 aa13.86□□□□□ -0.19
UPF3A-203ENST00000474056 APELAP0DMC3 54 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 CD40LGP29965 261 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 CBX5P45973 191 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 VBP1P61758 197 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 PRSS8Q16651 343 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 OR13F1Q8NGS4 319 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 SECTM1Q8WVN6 248 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 TCTEX1D2Q8WW35 142 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 DLX4Q92988 240 aaPredicted RBP13.85□□□□□ -0.19
UPF3A-203ENST00000474056 SLC25A46Q96AG3 418 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 S100A16Q96FQ6 103 aaKnown RBP13.85□□□□□ -0.19
UPF3A-203ENST00000474056 GPHA2Q96T91 129 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 DCUN1D5Q9BTE7 237 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 CCL28Q9NRJ3 127 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms