RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 A8MV72 311 aaPredicted RBP8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 ADAP1O75689 374 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 SNAPC5O75971 98 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 S1PR2O95136 353 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 KRASP01116 189 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 RLN2P04090 185 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 HNRNPCP07910 306 aaKnown RBP eCLIP8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 SAA4P35542 130 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 BPIFB3P59826 476 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 S100A10P60903 97 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 RAP2BP61225 183 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 RPL30P62888 115 aaKnown RBP8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 SCGB2A2Q13296 93 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 VMA21Q3ZAQ7 101 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 UTF1Q5T230 341 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 GGNBP1Q5YKI7 109 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 LYZL2Q7Z4W2 148 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 SELENOHQ8IZQ5 122 aaKnown RBP8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 VSTM2AQ8TAG5 236 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 OSR1Q8TAX0 266 aaPredicted RBP8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 NANPQ8TBE9 248 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 CHAC2Q8WUX2 184 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 C2orf50Q96LR7 162 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 TSNAXQ99598 290 aaKnown RBP8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 NABP2Q9BQ15 211 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 MS4A7Q9GZW8 240 aaPredicted RBP8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 KIAA1456Q9P272 454 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 CACFD1Q9UGQ2 172 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 ARHGAP32A7KAX9 2087 aa8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 FASNP49327 2511 aaKnown RBP8.34□□□□□ -1.07
PRPF38A-202ENST00000474048 ABCA12Q86UK0 2595 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 IGHV3OR16-10A0A075B7F0 116 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 CENPVL3A0A0U1RRI6 287 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 BTBD17A6NE02 478 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 H0YJW9 148 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 RAMP3O60896 148 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 SIX6O95475 246 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 FBP1P09467 338 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 CT45A6P0DMU7 189 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 CT45A5P0DMU8 189 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 CT45A7P0DMV0 189 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 PVALBP20472 110 aaPredicted RBP8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 G6PCP35575 357 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 SRP14P37108 136 aaKnown RBP8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 NUP62P37198 522 aaPredicted RBP8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 ZFP69Q49AA0 526 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 SSX9Q7RTT3 188 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 KRTAP1-3Q8IUG1 177 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 ZNF383Q8NA42 475 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 OR11H7Q8NGC8 314 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 OR4A16Q8NH70 328 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 THAP6Q8TBB0 222 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 LSM10Q969L4 123 aaKnown RBP8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 PPP1R14BQ96C90 147 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 C5orf30Q96GV9 206 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 C18orf12Q96KH6 178 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 ZNF251Q9BRH9 671 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 MMP24Q9Y5R2 645 aa8.33□□□□□ -1.08
PRPF38A-202ENST00000474048 CR1P17927 2039 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 IGHV3-72A0A0B4J1Y9 119 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 A0A1B0GU03 582 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 DBX1A6NMT0 343 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 TIMM23O14925 209 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 ACTL6BO94805 426 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 FAM106CPP0CH98 169 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 HLA-GP17693 338 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 CXCL3P19876 107 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 CD1BP29016 333 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 LGALS7P47929 136 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 EIF4EBP1Q13541 118 aaPredicted RBP8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 LRRC37A5PQ49AS3 106 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 SPNS3Q6ZMD2 512 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 LHFPL4Q7Z7J7 247 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 OR5AN1Q8NGI8 311 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 OR2T35Q8NGX2 323 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 OR2T10Q8NGZ9 312 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 DDB2Q92466 427 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 ST6GALNAC6Q969X2 333 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 SEC22AQ96IW7 307 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 RHOVQ96L33 236 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 NMES1Q9C002 83 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 RANGRFQ9HD47 186 aaPredicted RBP8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 ENY2Q9NPA8 101 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 NUP50Q9UKX7 468 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 WNK2Q9Y3S1 2297 aa8.32□□□□□ -1.08
PRPF38A-202ENST00000474048 L7N2F9 121 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 MED6O75586 246 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 MOSP00540 346 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 SLC25A6P12236 298 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 VAMP2P63027 116 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 ZNF585BQ52M93 769 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 TMEM177Q53S58 311 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 RUSC1-AS1Q66K80 236 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 HCP5Q6MZN7 132 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 BRD3OSQ6XYD6 125 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 FOXRED2Q8IWF2 684 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 MRPL41Q8IXM3 137 aaKnown RBP8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 TCTE3Q8IZS6 198 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 ZBTB8BQ8NAP8 495 aaPredicted RBP8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 LHFPL5Q8TAF8 219 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms