RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PTGES3Q15185 160 aaKnown RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 RBMY1FQ15415 496 aaKnown RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 SURF2Q15527 256 aaPredicted RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 TAL2Q16559 108 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 DEFB115Q30KQ5 88 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 MESTQ5EB52 335 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 OR10K2Q6IF99 312 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 DEGS2Q6QHC5 323 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 DRAM2Q6UX65 266 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 HIST2H3AQ71DI3 136 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 RPS27LQ71UM5 84 aaKnown RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 MSRB3Q8IXL7 192 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 CA13Q8N1Q1 262 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 LRRC18Q8N456 261 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 Q8N9L7 120 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 OR8J2Q8NGG1 315 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 OR10D4PQ8NGN7 298 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 NEK7Q8TDX7 302 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 THEM6Q8WUY1 208 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 CDS1Q92903 461 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 FAM104AQ969W3 186 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 FLYWCH2Q96CP2 140 aaKnown RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 OR52E6Q96RD3 313 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 ACBD6Q9BR61 282 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF2Q9BSG1 426 aaPredicted RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 TMEM208Q9BTX3 173 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 DOHHQ9BU89 302 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 SFXN3Q9BWM7 321 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 TSSK6Q9BXA6 273 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 DPY30Q9C005 99 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 FXYD6Q9H0Q3 95 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 METTL8Q9H825 291 aaKnown RBP2.78□□□□□ -1.96
BRCA1-212ENST00000473961 PLEKHA1Q9HB21 404 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 TMEM100Q9NV29 134 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 OPN4Q9UHM6 478 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 CLEC2DQ9UHP7 191 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 ZNF257Q9Y2Q1 563 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 SIGLEC9Q9Y336 463 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 KLF12Q9Y4X4 402 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 PHLPP1O60346 1717 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 QSER1Q2KHR3 1735 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 SHANK3Q9BYB0 1731 aa2.78□□□□□ -1.96
BRCA1-212ENST00000473961 CHD5Q8TDI0 1954 aa2.78□□□□□ -1.97
BRCA1-212ENST00000473961 MTCL1Q9Y4B5 1905 aaKnown RBP2.78□□□□□ -1.97
BRCA1-212ENST00000473961 NUP98P52948 1817 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 DSPPQ9NZW4 1301 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 TET2Q6N021 2002 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-212ENST00000473961 TRAV8-7A0A075B6U6 113 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 A0A087WUJ7 227 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 A0A0A6YYD5 115 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 A0A0U1RQV1 116 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 A0A1B0GVX0 72 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 A0A1B0GVY2 172 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 GGT3PA6NGU5 568 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 OR5H1A6NKK0 313 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 RNASEK-C17orf49H0YIS7 233 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 MFNGO00587 321 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 TP53I11O14683 189 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 PSPHP1O15172 72 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 RRP8O43159 456 aaKnown RBP2.77□□□□□ -1.97
BRCA1-212ENST00000473961 MFSD11O43934 449 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 AHSA1O95433 338 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 OXTP01178 125 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 APCSP02743 223 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 MT-ND4P03905 459 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 ADRA2AP08913 450 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 MMP7P09237 267 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-212ENST00000473961 SLC25A4P12235 298 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 PPIBP23284 216 aaKnown RBP2.77□□□□□ -1.97
BRCA1-212ENST00000473961 GNRHRP30968 328 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 S100A3P33764 101 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 CD200P41217 278 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 PPOXP50336 477 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 CAV3P56539 151 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 NDUFA6P56556 154 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 TPI1P60174 286 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 KRTAP10-8P60410 259 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 RPS25P62851 125 aaKnown RBP2.77□□□□□ -1.97
BRCA1-212ENST00000473961 RBX1P62877 108 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 SELENOWP63302 87 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 CDK6Q00534 326 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 MADCAM1Q13477 382 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 JOSD1Q15040 202 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-212ENST00000473961 RHEBQ15382 184 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 SCGB2B2Q4G0G5 96 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 MPV17L2Q567V2 206 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 NCMAPQ5T1S8 102 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 AKR1C8PQ5T2L2 129 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 SYPL2Q5VXT5 272 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 MFSD14CQ5VZR4 134 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 FBXW9Q5XUX1 488 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 C12orf73Q69YU5 71 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 BHLHA15Q7RTS1 189 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-212ENST00000473961 SAXO1Q8IYX7 474 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 CYB561D1Q8N8Q1 229 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 C15orf56Q8N910 161 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 ACBD4Q8NC06 268 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 OR11G2Q8NGC1 345 aa2.77□□□□□ -1.97
BRCA1-212ENST00000473961 OR4K2Q8NGD2 314 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms