RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 HPRT1P00492 218 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 CT45A6P0DMU7 189 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 CT45A5P0DMU8 189 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 CT45A7P0DMV0 189 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 UBE2KP61086 200 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 AANATQ16613 207 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 TMEM30BQ3MIR4 351 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 HSD17B11Q8NBQ5 300 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 OR10A7Q8NGE5 316 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 CD300LFQ8TDQ1 290 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 RAB40CQ96S21 281 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 QTRT1Q9BXR0 403 aaKnown RBP14.71□□□□□ -0.05
VARS2-206ENST00000473916 LPAR3Q9UBY5 353 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 HSPB7Q9UBY9 170 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 PRELID3BQ9Y3B1 194 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 MFSD2BA6NFX1 497 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 A6NNC1 897 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 FGF16O43320 207 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 REG1BP48304 166 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 TAGLNQ01995 201 aaKnown RBP14.71□□□□□ -0.05
VARS2-206ENST00000473916 SLC25A31Q9H0C2 315 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 ARV1Q9H2C2 271 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 PSENENQ9NZ42 101 aa14.71□□□□□ -0.05
VARS2-206ENST00000473916 RBMXL2O75526 392 aaKnown RBP14.7□□□□□ -0.06
VARS2-206ENST00000473916 IGHV1-8P0DP01 117 aa14.7□□□□□ -0.06
VARS2-206ENST00000473916 ARL16Q0P5N6 197 aa14.7□□□□□ -0.06
VARS2-206ENST00000473916 TOR2AQ5JU69 321 aa14.7□□□□□ -0.06
VARS2-206ENST00000473916 HAPLN4Q86UW8 402 aa14.7□□□□□ -0.06
VARS2-206ENST00000473916 NEU4Q8WWR8 484 aaPredicted RBP14.7□□□□□ -0.06
VARS2-206ENST00000473916 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.7□□□□□ -0.06
VARS2-206ENST00000473916 WSB1Q9Y6I7 421 aa14.7□□□□□ -0.06
VARS2-206ENST00000473916 RBFOX2O43251 390 aaKnown RBP eCLIP14.7□□□□□ -0.062e-6■■■■□ 23.3
VARS2-206ENST00000473916 IGKV1-16P04430 117 aa14.7□□□□□ -0.06
VARS2-206ENST00000473916 METTL15P1P0C7V9 234 aa14.7□□□□□ -0.06
VARS2-206ENST00000473916 THBS3P49746 956 aa14.7□□□□□ -0.06
VARS2-206ENST00000473916 RPL23AP62750 156 aaKnown RBP14.7□□□□□ -0.06
VARS2-206ENST00000473916 SPANXN5Q5MJ07 72 aa14.7□□□□□ -0.06
VARS2-206ENST00000473916 OR1S2Q8NGQ3 325 aa14.7□□□□□ -0.06
VARS2-206ENST00000473916 MRPL20Q9BYC9 149 aaKnown RBP14.7□□□□□ -0.06
VARS2-206ENST00000473916 CRYBG3Q68DQ2 2970 aa14.69□□□□□ -0.06
VARS2-206ENST00000473916 TNCP24821 2201 aa14.69□□□□□ -0.06
VARS2-206ENST00000473916 ATG12O94817 140 aa14.69□□□□□ -0.06
VARS2-206ENST00000473916 FSTL3O95633 263 aa14.69□□□□□ -0.06
VARS2-206ENST00000473916 ZNF833PQ6ZTB9 187 aa14.69□□□□□ -0.06
VARS2-206ENST00000473916 OR4S2Q8NH73 311 aa14.69□□□□□ -0.06
VARS2-206ENST00000473916 TMEM140Q9NV12 185 aa14.69□□□□□ -0.06
VARS2-206ENST00000473916 BORCS7-ASMTA0A0B4J1R7 106 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 ZNF705EA8MWA4 302 aaPredicted RBP14.68□□□□□ -0.06
VARS2-206ENST00000473916 C22orf46C9J442 243 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 I3L521 148 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 J3QR06 171 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 RPS16P62249 146 aaKnown RBP14.68□□□□□ -0.06
VARS2-206ENST00000473916 EIF5AP63241 154 aaKnown RBP14.68□□□□□ -0.06
VARS2-206ENST00000473916 WDR25Q64LD2 544 aaPredicted RBP14.68□□□□□ -0.06
VARS2-206ENST00000473916 RNF141Q8WVD5 230 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 SMIM8Q96KF7 97 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 GINS3Q9BRX5 216 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 MED9Q9NWA0 146 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 PFDN2Q9UHV9 154 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 TRBV23-1A0A0A0MS06 115 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 FAM90A26D6RGX4 464 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 SULT1A1P50225 295 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 BAXQ07812 192 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 OR8B3Q8NGG8 313 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 OR4C12Q96R67 309 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 OR8B2Q96RD0 313 aa14.68□□□□□ -0.06
VARS2-206ENST00000473916 C1QL1O75973 258 aa14.67□□□□□ -0.06
VARS2-206ENST00000473916 NQO2P16083 231 aa14.67□□□□□ -0.06
VARS2-206ENST00000473916 KIR2DS2P43631 304 aa14.67□□□□□ -0.06
VARS2-206ENST00000473916 STX12Q86Y82 276 aa14.67□□□□□ -0.06
VARS2-206ENST00000473916 ABHD12Q8N2K0 398 aa14.67□□□□□ -0.06
VARS2-206ENST00000473916 OR10X1Q8NGY0 326 aa14.67□□□□□ -0.06
VARS2-206ENST00000473916 RAB1CQ92928 201 aa14.67□□□□□ -0.06
VARS2-206ENST00000473916 NEIL1Q96FI4 390 aaPredicted RBP14.67□□□□□ -0.06
VARS2-206ENST00000473916 TIMD4Q96H15 378 aa14.67□□□□□ -0.06
VARS2-206ENST00000473916 CHODLQ9H9P2 273 aa14.67□□□□□ -0.06
VARS2-206ENST00000473916 MED13LQ71F56 2210 aa14.67□□□□□ -0.06
VARS2-206ENST00000473916 MED6O75586 246 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 F12P00748 615 aaPredicted RBP14.66□□□□□ -0.06
VARS2-206ENST00000473916 SPP1P10451 314 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 ERVK-16P61578 105 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 RUNX1Q01196 453 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 RELBQ01201 579 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 ZNF843Q8N446 348 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 DTD1Q8TEA8 209 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 RHOVQ96L33 236 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 MIOXQ9UGB7 285 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 VPS13CQ709C8 3753 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 PPIAL4CA0A0B4J2A2 164 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 SRRM4A7MD48 611 aaKnown RBP14.66□□□□□ -0.06
VARS2-206ENST00000473916 PPIAL4GP0DN37 164 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 MYOD1P15172 320 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 FHITP49789 147 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 ADTRPQ96IZ2 230 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 TMEM133Q9H2Q1 129 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 SLC35D1Q9NTN3 355 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 SESN1Q9Y6P5 492 aa14.66□□□□□ -0.06
VARS2-206ENST00000473916 A0A087X0M5 115 aa14.65□□□□□ -0.06
VARS2-206ENST00000473916 A0A1B0GX30 115 aa14.65□□□□□ -0.06
VARS2-206ENST00000473916 ATP6V0CP27449 155 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms