RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 EML6Q6ZMW3 1958 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 IQCF6A8MYZ5 107 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 K7ESF4 209 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 CDIPTO14735 213 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 IGHV3-9P01782 118 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 RFPL3SP0C7P2 107 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 G6PCP35575 357 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 TMPRSS3P57727 454 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 HTD2P86397 168 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 PMP22Q01453 160 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 Q0VG73 95 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 SMIM21Q3B7S5 101 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 PMS2CLQ68D20 193 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 C17orf78Q8N4C9 275 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 KLHDC1Q8N7A1 406 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 OR5AU1Q8NGC0 362 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 SDSLQ96GA7 329 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 C19orf24Q9BVV8 132 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 QTRT1Q9BXR0 403 aaKnown RBP5.14□□□□□ -1.59
HERC4-209ENST00000473533 CLN8Q9UBY8 286 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 PILRBQ9UKJ0 227 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 SDK2Q58EX2 2172 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 KLRC4-KLRK1H3BQV0 150 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 ZG16O60844 167 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 CD55P08174 381 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 STAG3L2P0CL84 134 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 STAG3L3P0CL85 134 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 AREGP15514 252 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 IGFBP4P22692 258 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 OR3A1P47881 315 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 TDGF1P3P51864 188 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 ZNF816Q0VGE8 651 aaPredicted RBP5.14□□□□□ -1.59
HERC4-209ENST00000473533 IZUMO4Q1ZYL8 232 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 FAM162BQ5T6X4 162 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 FBXW9Q5XUX1 488 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 ZNF705AQ6ZN79 300 aaPredicted RBP5.14□□□□□ -1.59
HERC4-209ENST00000473533 ZNF488Q96MN9 340 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 TBX15Q96SF7 602 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 ELOVL1Q9BW60 279 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 SAMD10Q9BYL1 202 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 CXXC4Q9H2H0 198 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 AKIRIN1Q9H9L7 192 aaPredicted RBP5.14□□□□□ -1.59
HERC4-209ENST00000473533 NPVFQ9HCQ7 196 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 PARD6AQ9NPB6 346 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 DCHS1Q96JQ0 3298 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 TRGV8A0A0C4DH27 118 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 A0A0G2JMM0 328 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 A0A1W2PPB8 328 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 A0A1W2PRS3 328 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 FAM166BA8MTA8 275 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 KIR3DP1A8MWS1 328 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 NEURL1O76050 574 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 S1PR2O95136 353 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 NDUFB4O95168 129 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 HOXC12P31275 282 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 GNB1P62873 340 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 SRYQ05066 204 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 RTP5Q14D33 572 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 PRAMEF5Q5TYX0 476 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 PRAMEF6Q5VXH4 476 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 SLC23A3Q6PIS1 610 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 BAGE3Q86Y29 109 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 BAGE2Q86Y30 109 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 SIGLECL1Q8N7X8 197 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 BCL2L2Q92843 193 aaPredicted RBP5.14□□□□□ -1.59
HERC4-209ENST00000473533 C11orf52Q96A22 123 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 HS3ST6Q96QI5 342 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 CHRDL1Q9BU40 450 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 GNB1LQ9BYB4 327 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 HEYLQ9NQ87 328 aaPredicted RBP5.14□□□□□ -1.59
HERC4-209ENST00000473533 DCAF16Q9NXF7 216 aa5.14□□□□□ -1.59
HERC4-209ENST00000473533 SLC25A10Q9UBX3 287 aaPredicted RBP5.14□□□□□ -1.59
HERC4-209ENST00000473533 TRGV10A0A0A0MS01 117 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 MARCH11A6NNE9 402 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 ATXN7O15265 892 aaPredicted RBP5.13□□□□□ -1.59
HERC4-209ENST00000473533 HBZP02008 142 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 OR5G3P0C626 314 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 GCH1P30793 250 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 TIMP3P35625 211 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 GPR12P47775 334 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 THBS3P49746 956 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 TFF3Q07654 80 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 EIF4EBP1Q13541 118 aaPredicted RBP5.13□□□□□ -1.59
HERC4-209ENST00000473533 OR10J3Q5JRS4 329 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 C9orf135Q5VTT2 229 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 INO80CQ6PI98 192 aaPredicted RBP5.13□□□□□ -1.59
HERC4-209ENST00000473533 TOMM20LQ6UXN7 152 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 TEX43Q6ZNM6 134 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 RNF2Q99496 336 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 PATZ1Q9HBE1 687 aaKnown RBP5.13□□□□□ -1.59
HERC4-209ENST00000473533 HES4Q9HCC6 221 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 JPT1Q9UK76 154 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 SLC45A2Q9UMX9 530 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 A0A1W2PR80 420 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 C21orf140B9A014 251 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 C12orf77C9JDV5 145 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 CFIP05156 583 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 REG1AP05451 166 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 CCL2P13500 99 aa5.13□□□□□ -1.59
HERC4-209ENST00000473533 WNT5AP41221 380 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms