RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 ORM2P19652 201 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 PRTN3P24158 256 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 APLNRP35414 380 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 HLA-DRB3P79483 266 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 PRR3P79522 188 aaKnown RBP4.66□□□□□ -1.66
RTF1-203ENST00000473214 PAX8Q06710 450 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 IL15RAQ13261 267 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 RHEBQ15382 184 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 OR8G1Q15617 311 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 KCNJ8Q15842 424 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 DNM1P46Q6ZS02 220 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 ZCCHC24Q8N2G6 241 aaKnown RBP4.66□□□□□ -1.66
RTF1-203ENST00000473214 DEFB125Q8N687 156 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 ANKRD29Q8N6D5 301 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 C11orf72Q8NBR9 251 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 OR10G6Q8NH81 332 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 NTN5Q8WTR8 489 aaPredicted RBP4.66□□□□□ -1.66
RTF1-203ENST00000473214 GEMIN6Q8WXD5 167 aaKnown RBP4.66□□□□□ -1.66
RTF1-203ENST00000473214 CCL17Q92583 94 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 SMIM8Q96KF7 97 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 OR5M11Q96RB7 305 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 LRRC61Q9BV99 259 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 CACYBPQ9HB71 228 aaKnown RBP4.66□□□□□ -1.66
RTF1-203ENST00000473214 NOX3Q9HBY0 568 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 SLCO1B3Q9NPD5 702 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 ZNF331Q9NQX6 463 aaPredicted RBP4.66□□□□□ -1.66
RTF1-203ENST00000473214 HEBP1Q9NRV9 189 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 RFNGQ9Y644 331 aa4.66□□□□□ -1.66
RTF1-203ENST00000473214 FLNBO75369 2602 aaKnown RBP4.66□□□□□ -1.66
RTF1-203ENST00000473214 MAST4O15021 2626 aa4.65□□□□□ -1.66
RTF1-203ENST00000473214 IGF2RP11717 2491 aa4.65□□□□□ -1.66
RTF1-203ENST00000473214 IGKV6D-41A0A0C4DH26 115 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 SMIM35A0A1B0GVV1 85 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 INMT-MINDY4F8WBC2 141 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 AIPO00170 330 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 UPK2O00526 184 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 DUS4LO95620 317 aaKnown RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 IGHG1P01857 330 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 IL1RNP18510 177 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 BLVRBP30043 206 aaPredicted RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 CMPK1P30085 196 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 CD70P32970 193 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 SPRP35270 261 aaPredicted RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 CTBP2P56545 445 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 RPS21P63220 83 aaKnown RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 Q0VFX4 171 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 SLC10A2Q12908 348 aaPredicted RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 PNOCQ13519 176 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 FCN2Q15485 313 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 DNLZQ5SXM8 178 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 RUSC1-AS1Q66K80 236 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 KDM4DQ6B0I6 523 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 LCN12Q6JVE5 192 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 ZNF589Q86UQ0 364 aaPredicted RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 CIARTQ8N365 385 aaPredicted RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 OR8B12Q8NGG6 310 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 OR5A1Q8NGJ0 315 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 OR8S1Q8NH09 359 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 OR4C6Q8NH72 309 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 ARL11Q969Q4 196 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 ZNF689Q96CS4 500 aaPredicted RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 RNF185Q96GF1 192 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 SLC25A44Q96H78 314 aaPredicted RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 GPR82Q96P67 336 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 TP53RKQ96S44 253 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 LYSMD1Q96S90 227 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 PRSS27Q9BQR3 290 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 TMEM147Q9BVK8 224 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 RBM38Q9H0Z9 239 aaKnown RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 POPDC3Q9HBV1 291 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 UBQLN4Q9NRR5 601 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 RBFOX1Q9NWB1 397 aaKnown RBP4.65□□□□□ -1.67
RTF1-203ENST00000473214 SIGLEC7Q9Y286 467 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 WASHC3Q9Y3C0 194 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 UNC79Q9P2D8 2635 aa4.65□□□□□ -1.67
RTF1-203ENST00000473214 CACNA1IQ9P0X4 2223 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 PHF3Q92576 2039 aaKnown RBP4.64□□□□□ -1.67
RTF1-203ENST00000473214 SMIM26A0A096LP01 95 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 IGLV5-39A0A0G2JS06 123 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 K7EPK0 472 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 HCRTR1O43613 425 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 KBTBD11O94819 623 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 IGHMP01871 453 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 CRYBA1P05813 215 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 LGALS1P09382 135 aaKnown RBP4.64□□□□□ -1.67
RTF1-203ENST00000473214 RAB3BP20337 219 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 NPY1RP25929 384 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 MPGP29372 298 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 S100A11P31949 105 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 EIF2B2P49770 351 aaKnown RBP4.64□□□□□ -1.67
RTF1-203ENST00000473214 SLC25A1P53007 311 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 GFERP55789 205 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 KRTAP10-9P60411 292 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 KRTAP10-11P60412 298 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 SNRPD2P62316 118 aaKnown RBP4.64□□□□□ -1.67
RTF1-203ENST00000473214 RPS24P62847 133 aaKnown RBP4.64□□□□□ -1.67
RTF1-203ENST00000473214 SELENOWP63302 87 aa4.64□□□□□ -1.67
RTF1-203ENST00000473214 MRPS21P82921 87 aaKnown RBP4.64□□□□□ -1.67
RTF1-203ENST00000473214 MEF2CQ06413 473 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms