RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 AIFM2Q9BRQ8 373 aa18.02■□□□□ 0.48
PAXBP1-208ENST00000472588 MED28Q9H204 178 aa18.02■□□□□ 0.48
PAXBP1-208ENST00000472588 PLEKHA2Q9HB19 425 aa18.02■□□□□ 0.48
PAXBP1-208ENST00000472588 DUXBA0A1W2PPF3 345 aa18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 A0A1W2PPI3 338 aa18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 BRS3P32247 399 aa18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 LPAR6P43657 344 aa18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 KRTAP1-1Q07627 177 aa18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 ANKRD55Q3KP44 614 aa18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 RUSC1-AS1Q66K80 236 aa18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 OR4C13Q8NGP0 309 aa18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 RBPMSQ93062 196 aaKnown RBP18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 MS4A7Q9GZW8 240 aaPredicted RBP18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 YAE1D1Q9NRH1 226 aa18.01■□□□□ 0.47
PAXBP1-208ENST00000472588 ZANQ9Y493 2812 aa18■□□□□ 0.47
PAXBP1-208ENST00000472588 RAMP3O60896 148 aa18■□□□□ 0.47
PAXBP1-208ENST00000472588 FSHBP01225 129 aa18■□□□□ 0.47
PAXBP1-208ENST00000472588 HNF1AP20823 631 aa18■□□□□ 0.47
PAXBP1-208ENST00000472588 CD1BP29016 333 aa18■□□□□ 0.47
PAXBP1-208ENST00000472588 HABP2Q14520 560 aaPredicted RBP18■□□□□ 0.47
PAXBP1-208ENST00000472588 ZNF585BQ52M93 769 aa18■□□□□ 0.47
PAXBP1-208ENST00000472588 TMEM268Q5VZI3 342 aa18■□□□□ 0.47
PAXBP1-208ENST00000472588 FLYWCH2Q96CP2 140 aaKnown RBP18■□□□□ 0.47
PAXBP1-208ENST00000472588 SMR3AQ99954 134 aa18■□□□□ 0.47
PAXBP1-208ENST00000472588 COMMD9Q9P000 198 aa18■□□□□ 0.47
PAXBP1-208ENST00000472588 hCG_2014768A0A024R1R8 64 aa17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 TIMM23O14925 209 aa17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 FBP1P09467 338 aa17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 BRWD1-AS2P59051 145 aa17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 RRAS2P62070 204 aaPredicted RBP17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 LIN54Q6MZP7 749 aa17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 OSR1Q8TAX0 266 aaPredicted RBP17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 MEGF9Q9H1U4 602 aa17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 GSX1Q9H4S2 264 aaPredicted RBP17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 RAB18Q9NP72 206 aa17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 TMEM160Q9NX00 188 aa17.99■□□□□ 0.47
PAXBP1-208ENST00000472588 DBX1A6NMT0 343 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 CRYZL1O95825 349 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 HRASP01112 189 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 IFNA21P01568 189 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 C9orf139Q6ZV77 190 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 SELENOHQ8IZQ5 122 aaKnown RBP17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 AJUBAQ96IF1 538 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 RNF5Q99942 180 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 TMED3Q9Y3Q3 217 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 A0A1B0GVG6 124 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 NQO2P16083 231 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 TMEM177Q53S58 311 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 FAM120AOSQ5T036 256 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 C17orf50Q8WW18 174 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 CFHR4Q92496 578 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 RRNAD1Q96FB5 475 aaKnown RBP17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 PRR13Q9NZ81 148 aa17.98■□□□□ 0.47
PAXBP1-208ENST00000472588 A0A0U1RQK1 487 aa17.97■□□□□ 0.47
PAXBP1-208ENST00000472588 VDAC1P21796 283 aa17.97■□□□□ 0.47
PAXBP1-208ENST00000472588 AKR1C2P52895 323 aa17.97■□□□□ 0.47
PAXBP1-208ENST00000472588 ERVK-16P61578 105 aa17.97■□□□□ 0.47
PAXBP1-208ENST00000472588 CADM3Q8N126 398 aa17.97■□□□□ 0.47
PAXBP1-208ENST00000472588 DYNAPQ8N1N2 210 aa17.97■□□□□ 0.47
PAXBP1-208ENST00000472588 SLC35G3Q8N808 338 aa17.97■□□□□ 0.47
PAXBP1-208ENST00000472588 RNASE11Q8TAA1 199 aaKnown RBP17.97■□□□□ 0.47
PAXBP1-208ENST00000472588 LHFPL5Q8TAF8 219 aa17.97■□□□□ 0.47
PAXBP1-208ENST00000472588 IGHV3-72A0A0B4J1Y9 119 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 HMX3A6NHT5 357 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 SHOXO15266 292 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 S1PR2O95136 353 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 IGKV1-16P04430 117 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 FAM106CPP0CH98 169 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 TRAPPC2P0DI81 140 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 TRAPPC2BP0DI82 140 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 HLA-GP17693 338 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 LGALS7P47929 136 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 BCAP31P51572 246 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 DYNLT3P51808 116 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 AANATQ16613 207 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 CLEC9AQ6UXN8 241 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 THNSL2Q86YJ6 484 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 FAM219AQ8IW50 185 aa17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 LSM10Q969L4 123 aaKnown RBP17.96■□□□□ 0.47
PAXBP1-208ENST00000472588 VGLL3A8MV65 326 aa17.95■□□□□ 0.46
PAXBP1-208ENST00000472588 VENTXO95231 258 aa17.95■□□□□ 0.46
PAXBP1-208ENST00000472588 KRASP01116 189 aa17.95■□□□□ 0.46
PAXBP1-208ENST00000472588 HOXB5P09067 269 aa17.95■□□□□ 0.46
PAXBP1-208ENST00000472588 SRP14P37108 136 aaKnown RBP17.95■□□□□ 0.46
PAXBP1-208ENST00000472588 RPS16P62249 146 aaKnown RBP17.95■□□□□ 0.46
PAXBP1-208ENST00000472588 SCGB2A2Q13296 93 aa17.95■□□□□ 0.46
PAXBP1-208ENST00000472588 LYZL2Q7Z4W2 148 aa17.95■□□□□ 0.46
PAXBP1-208ENST00000472588 OR2T10Q8NGZ9 312 aa17.95■□□□□ 0.46
PAXBP1-208ENST00000472588 R3HDM4Q96D70 268 aa17.95■□□□□ 0.46
PAXBP1-208ENST00000472588 MARCH11A6NNE9 402 aa17.94■□□□□ 0.46
PAXBP1-208ENST00000472588 FAM90A9PA6NNJ1 464 aa17.94■□□□□ 0.46
PAXBP1-208ENST00000472588 LY6G6DO95868 133 aa17.94■□□□□ 0.46
PAXBP1-208ENST00000472588 MOSP00540 346 aa17.94■□□□□ 0.46
PAXBP1-208ENST00000472588 IGKV1-39P01597 117 aa17.94■□□□□ 0.46
PAXBP1-208ENST00000472588 IGKV1D-39P04432 117 aa17.94■□□□□ 0.46
PAXBP1-208ENST00000472588 SULT1A3P0DMM9 295 aa17.94■□□□□ 0.46
PAXBP1-208ENST00000472588 SULT1A4P0DMN0 295 aa17.94■□□□□ 0.46
PAXBP1-208ENST00000472588 DMBX1Q8NFW5 382 aa17.94■□□□□ 0.46
PAXBP1-208ENST00000472588 SEC22AQ96IW7 307 aa17.94■□□□□ 0.46
PAXBP1-208ENST00000472588 HARBI1Q96MB7 349 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms