RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 LINC00473A8K010 186 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 SHOXO15266 292 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 SAP30O75446 220 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 CNIH1O95406 144 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 TRGV3P03979 118 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 CLEC2LP0C7M8 214 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 CD40LGP29965 261 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 DUTP33316 252 aaKnown RBP6.96□□□□□ -1.3
USF1-204ENST00000472217 SDC2P34741 201 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 TAGLNQ01995 201 aaKnown RBP6.96□□□□□ -1.3
USF1-204ENST00000472217 MXD1Q05195 221 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 CBX3Q13185 183 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 RTL8BQ17RB0 113 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 MRGPRG-AS1Q2M3A8 158 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 HACD4Q5VWC8 232 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 ZNF773Q6PK81 442 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 POC5Q8NA72 575 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 NUDCD2Q8WVJ2 157 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 DDB2Q92466 427 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 RHOVQ96L33 236 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 CENPOQ9BU64 300 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 ST6GALNAC5Q9BVH7 336 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 SLA2Q9H6Q3 261 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 RNF167Q9H6Y7 350 aa6.96□□□□□ -1.3
USF1-204ENST00000472217 J3QRK9 145 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 SSX5O60225 188 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 SCGNO76038 276 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 LY86O95711 162 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 CRYZL1O95825 349 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 HSPB1P04792 205 aaKnown RBP6.95□□□□□ -1.3
USF1-204ENST00000472217 RRASP10301 218 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 NFYAP23511 347 aaPredicted RBP6.95□□□□□ -1.3
USF1-204ENST00000472217 GNG2P59768 71 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 IDO2Q6ZQW0 420 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 ZNF429Q86V71 674 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 ZNF645Q8N7E2 425 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 OR5T1Q8NG75 326 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 SLC25A38Q96DW6 304 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 ADTRPQ96IZ2 230 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 DCSTAMPQ9H295 470 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 ZNF355PQ9NSJ1 428 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 RHBDL2Q9NX52 303 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 OR2W1Q9Y3N9 320 aa6.95□□□□□ -1.3
USF1-204ENST00000472217 IGKV1D-13A0A0B4J2D9 117 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 LOC100506127A0A0U1RQW1 187 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 H3BUA1 57 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 HLA-DQB1P01920 261 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 CTXN2P0C2S0 81 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 IGKV1-13P0DP09 117 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 UBE2KP61086 200 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 PITPNAQ00169 270 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 DEFA5Q01523 94 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 NEDD8Q15843 81 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 TNXAQ16473 311 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 PRSS8Q16651 343 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 VMA21Q3ZAQ7 101 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 ACSM6Q6P461 480 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 CNIH2Q6PI25 160 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 KCTD9Q7L273 389 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 TEX45Q8NA69 505 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 OR5H6Q8NGV6 325 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 OSR1Q8TAX0 266 aaPredicted RBP6.94□□□□□ -1.3
USF1-204ENST00000472217 ANXA10Q9UJ72 324 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 ETV7Q9Y603 341 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
USF1-204ENST00000472217 C13orf42A0A1B0GVH6 325 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 MSGN1A6NI15 193 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 IGLV2-14P01704 120 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 NHLRC4P0CG21 123 aaPredicted RBP6.93□□□□□ -1.3
USF1-204ENST00000472217 SAA1P0DJI8 122 aaPredicted RBP6.93□□□□□ -1.3
USF1-204ENST00000472217 APELAP0DMC3 54 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 SPNP16150 400 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 CD36P16671 472 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 SCAND1P57086 179 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 RPL30P62888 115 aaKnown RBP6.93□□□□□ -1.3
USF1-204ENST00000472217 KCTD21Q4G0X4 260 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 OR2B11Q5JQS5 317 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 IDNKQ5T6J7 187 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 SRSF12Q8WXF0 261 aaKnown RBP6.93□□□□□ -1.3
USF1-204ENST00000472217 ACOT12Q8WYK0 555 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 TMEM68Q96MH6 324 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 WWC2-AS2Q96NR7 200 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 PHB2Q99623 299 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 TINAGL1Q9GZM7 467 aaPredicted RBP6.93□□□□□ -1.3
USF1-204ENST00000472217 ZNF430Q9H8G1 570 aaPredicted RBP6.93□□□□□ -1.3
USF1-204ENST00000472217 COA4Q9NYJ1 87 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 RBMX2Q9Y388 322 aaKnown RBP6.93□□□□□ -1.3
USF1-204ENST00000472217 PRELID3BQ9Y3B1 194 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 SMAD5-AS1Q9Y6J3 95 aa6.93□□□□□ -1.3
USF1-204ENST00000472217 TRAV18A0A075B6X5 111 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 A0A0G2JLM5 398 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 ANKRD34BA5PLL1 514 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 FCGR3BO75015 233 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 RBMXL2O75526 392 aaKnown RBP6.92□□□□□ -1.3
USF1-204ENST00000472217 TUSC2O75896 110 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 SLC22A5O76082 557 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 BRI3O95415 125 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 AADACP22760 399 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 DYRK1AQ13627 763 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 CDK10Q15131 360 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms