RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PLEKHA1Q9HB21 404 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 ABCB9Q9NP78 766 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 TMEM138Q9NPI0 162 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 ESM1Q9NQ30 184 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 PTTG3PQ9NZH4 202 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 NOP16Q9Y3C1 178 aaKnown RBP3.63□□□□□ -1.83
CCDC39-202ENST00000471307 MPC1Q9Y5U8 109 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 V9GY05 133 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 LRP5LA4QPB2 252 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 IQCF6A8MYZ5 107 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 ATP6V1G2-DDX39BF2Z307 99 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 H3BSH0 61 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 J3QKU1 62 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 SULT1B1O43704 296 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 GMDSO60547 372 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 SERF1AO75920 110 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 NRASP01111 189 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 MAS1P04201 325 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 CRYGBP07316 175 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 OCMP0CE72 109 aaPredicted RBP3.62□□□□□ -1.83
CCDC39-202ENST00000471307 CT45A10P0DMU9 189 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 ATF1P18846 271 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 RAB3AP20336 220 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 KITLGP21583 273 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 PRKACBP22694 351 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 P2RY1P47900 373 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 EVX1P49640 407 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 FABP6P51161 128 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 PPP3R1P63098 170 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 BSPH1Q075Z2 132 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 PSG7Q13046 419 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 MAB21L1Q13394 359 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 DYNC1I2Q13409 638 aaKnown RBP3.62□□□□□ -1.83
CCDC39-202ENST00000471307 PLCXD3Q63HM9 321 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 GLT8D1Q68CQ7 371 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 FAHD2BQ6P2I3 314 aaPredicted RBP3.62□□□□□ -1.83
CCDC39-202ENST00000471307 LINC00299Q6ZSB3 139 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 C14orf178Q8N769 122 aaPredicted RBP3.62□□□□□ -1.83
CCDC39-202ENST00000471307 ACBD4Q8NC06 268 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 OR8G5Q8NG78 346 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 OR1M1Q8NGA1 313 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 OR5A2Q8NGI9 324 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 NDNFQ8TB73 568 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 SYNPRQ8TBG9 265 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 SLC25A40Q8TBP6 338 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 ACOT12Q8WYK0 555 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 AP3S1Q92572 193 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 RAB3CQ96E17 227 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 ADAT3Q96EY9 351 aaPredicted RBP3.62□□□□□ -1.83
CCDC39-202ENST00000471307 CPNE2Q96FN4 548 aaPredicted RBP3.62□□□□□ -1.83
CCDC39-202ENST00000471307 FAHD2AQ96GK7 314 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 UQCC2Q9BRT2 126 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 OR2J1Q9GZK6 312 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 CHST5Q9GZS9 411 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 OR51B6Q9H340 312 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 RNF167Q9H6Y7 350 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 ZNF442Q9H7R0 627 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 CA10Q9NS85 328 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 TMEM100Q9NV29 134 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 TAS2R4Q9NYW5 299 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 CCDC59Q9P031 241 aaKnown RBP3.62□□□□□ -1.83
CCDC39-202ENST00000471307 PEF1Q9UBV8 284 aaKnown RBP3.62□□□□□ -1.83
CCDC39-202ENST00000471307 PITPNC1Q9UKF7 332 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 SLC7A11Q9UPY5 501 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 RHBDD3Q9Y3P4 386 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 LRRK2Q5S007 2527 aa3.62□□□□□ -1.83
CCDC39-202ENST00000471307 PKDREJQ9NTG1 2253 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 RELNP78509 3460 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 IGLV8-61A0A075B6I0 122 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 IGLV3-9A0A075B6K5 115 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 TRAV8-7A0A075B6U6 113 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 IGKV1-9A0A0C4DH69 117 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 LINC00854A0A1B0GVQ3 168 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 A6NIN4 97 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 IFITM5A6NNB3 132 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 ZNF850A8MQ14 1090 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 DEFB108AA8MXU0 73 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 G3V4G9 280 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 AIPO00170 330 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 SLC17A2O00624 439 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 IGLV1-47P01700 117 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 UBBP0CG47 229 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 HTR2CP28335 458 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 ZNF93P35789 620 aaPredicted RBP3.61□□□□□ -1.83
CCDC39-202ENST00000471307 TGFBR1P36897 503 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 MPV17P39210 176 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 CDKN1BP46527 198 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 RBP2P50120 134 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 KLF3P57682 345 aaPredicted RBP3.61□□□□□ -1.83
CCDC39-202ENST00000471307 ERVS71-1P61550 626 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 MXD1Q05195 221 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 PRDX4Q13162 271 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 KISS1Q15726 138 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 CEACAM21Q3KPI0 293 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 ZNF404Q494X3 552 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 C1orf100Q5SVJ3 147 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 OR2T2Q6IF00 324 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 SFXN4Q6P4A7 337 aa3.61□□□□□ -1.83
CCDC39-202ENST00000471307 CLEC18BQ6UXF7 455 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms