RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ARAP2Q8WZ64 1704 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 IGKV3-7A0A075B6H7 116 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 ZNF705FA8MVS1 300 aaPredicted RBP0.11□□□□□ -2.39
UBXN4-207ENST00000471246 LOC730098B7Z3J9 87 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 H3BPC8 53 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 K7EN84 100 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 K7EQS6 105 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 AKR7A2O43488 359 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 SPOPO43791 374 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 PDCD6O75340 191 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 LY6HO94772 140 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 CD8AP01732 235 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 IGKV5-2P06315 115 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 SLC2A1P11166 492 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 GABRA3P34903 492 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 ARR3P36575 388 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 INPP1P49441 399 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 RAP1GDS1P52306 607 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 AKR1C2P52895 323 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 MP68P56378 58 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 CLDN8P56748 225 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 DAOAP59103 153 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 RAB2AP61019 212 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 RELAQ04206 551 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 BSPH1Q075Z2 132 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 PLCXD2Q0VAA5 305 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 ZNF791Q3KP31 576 aaPredicted RBP0.11□□□□□ -2.39
UBXN4-207ENST00000471246 HIKESHIQ53FT3 197 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 RESP18Q5W5W9 173 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 CLEC20AQ6ZU45 233 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 OLIG3Q7RTU3 272 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 SLC35F6Q8N357 371 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 ZNF283Q8N7M2 679 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 ASCC1Q8N9N2 400 aaKnown RBP0.11□□□□□ -2.39
UBXN4-207ENST00000471246 FAM184AQ8NB25 1140 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 FBXO36Q8NEA4 188 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 LHFPL5Q8TAF8 219 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 RNF133Q8WVZ7 376 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 Q96M85 177 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 NAP1L5Q96NT1 182 aaPredicted RBP0.11□□□□□ -2.39
UBXN4-207ENST00000471246 VAT1Q99536 393 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 SUCNR1Q9BXA5 334 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 CDCA4Q9BXL8 241 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 TM6SF2Q9BZW4 377 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 IQCGQ9H095 443 aaKnown RBP0.11□□□□□ -2.39
UBXN4-207ENST00000471246 C11orf49Q9H6J7 331 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 SCML1Q9UN30 329 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 KIF14Q15058 1648 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 MROH1Q8NDA8 1641 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 GOLGA4Q13439 2230 aaKnown RBP0.11□□□□□ -2.39
UBXN4-207ENST00000471246 SBF1O95248 1867 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 RGPD3A6NKT7 1758 aaPredicted RBP0.11□□□□□ -2.39
UBXN4-207ENST00000471246 RGPD4Q7Z3J3 1758 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 BCL9O00512 1426 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 ZFYVE9O95405 1425 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 PLCH1Q4KWH8 1693 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 TOPAZ1Q8N9V7 1692 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 ABCA8O94911 1581 aa0.11□□□□□ -2.39
UBXN4-207ENST00000471246 CCDC18Q5T9S5 1454 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 ARHGAP35Q9NRY4 1499 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 A0A0G2JMZ2 1700 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 LY75O60449 1722 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 PKD1L3Q7Z443 1732 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 ANKRD26Q9UPS8 1709 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 SCN10AQ9Y5Y9 1956 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 DNMT1P26358 1616 aaKnown RBP0.1□□□□□ -2.39
UBXN4-207ENST00000471246 ABCA6Q8N139 1617 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 ABCC12Q96J65 1359 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 RAB3GAP2Q9H2M9 1393 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 ABCC2Q92887 1545 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 TRBV6-5A0A0K0K1A5 114 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 C11orf86A6NJI1 115 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 PRMT5O14744 637 aaPredicted RBP0.1□□□□□ -2.39
UBXN4-207ENST00000471246 FGF16O43320 207 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 GNRH2O43555 120 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 C1QCP02747 245 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 CPN2P22792 545 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 PPP1CCP36873 323 aaKnown RBP0.1□□□□□ -2.39
UBXN4-207ENST00000471246 CBX5P45973 191 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 RAB38P57729 211 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 RHOAP61586 193 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 HBG1P69891 147 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 HBG2P69892 147 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 HOXC5Q00444 222 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 ZNF90Q03938 601 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 SLC38A11Q08AI6 406 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 CIRBPQ14011 172 aaKnown RBP0.1□□□□□ -2.39
UBXN4-207ENST00000471246 PDGFRLQ15198 375 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 GUSBP1Q15486 140 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 PSG3Q16557 428 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 SPRNQ5BIV9 151 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 PIP5KL1Q5T9C9 394 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 Q5VSD8 79 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 EBLN2Q6P2I7 272 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 RASL11AQ6T310 242 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 ASCL4Q6XD76 172 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 DGAT2L6Q6ZPD8 337 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 GLT6D1Q7Z4J2 308 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 KRTAP19-3Q7Z4W3 81 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 LRRC28Q86X40 367 aaPredicted RBP0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms